RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 TNPO3Q9Y5L0 923 aaKnown RBP5.15□□□□□ -1.58
PHF3-210ENST00000509876 KAT6AQ92794 2004 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 FAM95CA0A1B0GW59 222 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 FAM170BA6NMN3 283 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 ISM1B1AKI9 464 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 SUPT7LO94864 414 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 KRT6AP02538 564 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 KRT6BP04259 564 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 TSHRP16473 764 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 ZNF30P17039 623 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 PBX2P40425 430 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 GRIA4P48058 902 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 KRT6CP48668 564 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 ZNF132P52740 706 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 CLDN10P78369 228 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 CSTF1Q05048 431 aaKnown RBP5.15□□□□□ -1.58
PHF3-210ENST00000509876 HLA-DQA1Q5Y7H0 255 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 CERS6Q6ZMG9 384 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 CCNI2Q6ZMN8 369 aaPredicted RBP5.15□□□□□ -1.58
PHF3-210ENST00000509876 FBXO39Q8N4B4 442 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 PLD5Q8N7P1 536 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 TTC29Q8NA56 475 aaPredicted RBP5.15□□□□□ -1.58
PHF3-210ENST00000509876 LZICQ8WZA0 190 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 PRICKLE1Q96MT3 831 aaPredicted RBP5.15□□□□□ -1.58
PHF3-210ENST00000509876 FIZ1Q96SL8 496 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 DPEP2Q9H4A9 486 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 LRRC19Q9H756 370 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 CD84Q9UIB8 345 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 ASF1AQ9Y294 204 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 ORC6Q9Y5N6 252 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 LCA5LO95447 670 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 KRT16P08779 473 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 SOAT1P35610 550 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 CNTN1Q12860 1018 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 CCDC153Q494R4 210 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 SNAP47Q5SQN1 464 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 DAB2IPQ5VWQ8 1189 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 HGSNATQ68CP4 663 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 RHBDF2Q6PJF5 856 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 CYP20A1Q6UW02 462 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 Q6ZVU0 165 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 LRRC15Q8TF66 581 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 SGF29Q96ES7 293 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 TEX12Q9BXU0 123 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 OBP2AQ9NY56 170 aa5.15□□□□□ -1.58
PHF3-210ENST00000509876 CXXC1Q9P0U4 656 aaPredicted RBP5.15□□□□□ -1.58
PHF3-210ENST00000509876 PIPSLA2A3N6 862 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 GABRDO14764 452 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 STC2O76061 302 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 CDK14O94921 469 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 PIRTP0C851 137 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 PECAM1P16284 738 aaPredicted RBP5.15□□□□□ -1.59
PHF3-210ENST00000509876 TPSB2P20231 275 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 RPL22P35268 128 aaKnown RBP5.15□□□□□ -1.59
PHF3-210ENST00000509876 GNPDA1P46926 289 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 SUOXP51687 545 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 TPSAB1Q15661 275 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 TRIM71Q2Q1W2 868 aaKnown RBP5.15□□□□□ -1.59
PHF3-210ENST00000509876 LRRC8BQ6P9F7 803 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 KLHDC10Q6PID8 442 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 ENPP7Q6UWV6 458 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 PRUNE1Q86TP1 453 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 GPSM1Q86YR5 675 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 GPR135Q8IZ08 494 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 C4orf33Q8N1A6 199 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 ATOH1Q92858 354 aaPredicted RBP5.15□□□□□ -1.59
PHF3-210ENST00000509876 KLHDC7BQ96G42 594 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 SGSM3Q96HU1 749 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 RSRC1Q96IZ7 334 aaKnown RBP5.15□□□□□ -1.59
PHF3-210ENST00000509876 ZNF514Q96K75 400 aaPredicted RBP5.15□□□□□ -1.59
PHF3-210ENST00000509876 TLR10Q9BXR5 811 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 NUF2Q9BZD4 464 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 MARCH5Q9NX47 278 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 ITM2BQ9Y287 266 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 FSCN2O14926 492 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 ANGPT2O15123 496 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 BUD23O43709 281 aaKnown RBP5.15□□□□□ -1.59
PHF3-210ENST00000509876 USP1O94782 785 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 CDKN2BP42772 138 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 CXCL12P48061 93 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 CLCN4P51793 760 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 RPS21P63220 83 aaKnown RBP5.15□□□□□ -1.59
PHF3-210ENST00000509876 SATB1Q01826 763 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 TMEM164Q5U3C3 297 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 AGBL2Q5U5Z8 902 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 TXNDC5Q8NBS9 432 aaKnown RBP5.15□□□□□ -1.59
PHF3-210ENST00000509876 ST13P5Q8NFI4 369 aaPredicted RBP5.15□□□□□ -1.59
PHF3-210ENST00000509876 AGR3Q8TD06 166 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 OTUB1Q96FW1 271 aaPredicted RBP5.15□□□□□ -1.59
PHF3-210ENST00000509876 VCX3BQ9H321 246 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 CWH43Q9H720 699 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 SGK2Q9HBY8 427 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 TXLNGQ9NUQ3 528 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 HCFC1R1Q9NWW0 138 aa5.15□□□□□ -1.59
PHF3-210ENST00000509876 DNMT3BQ9UBC3 853 aaKnown RBP5.15□□□□□ -1.59
PHF3-210ENST00000509876 ANKDD1BA6NHY2 528 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 ALPIP09923 528 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 ARFIP2P53365 341 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 PRKAA2P54646 552 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 HADHBP55084 474 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms