RNA–Protein interactions for RNA: ENST00000509517.1

OTUD4-207, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 617 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-207ENST00000509517 SPATA2LQ8IUW3 424 aaPredicted RBP3.39□□□□□ -1.87
OTUD4-207ENST00000509517 SLC35F3Q8IY50 421 aa3.39□□□□□ -1.87
OTUD4-207ENST00000509517 CADM4Q8NFZ8 388 aa3.39□□□□□ -1.87
OTUD4-207ENST00000509517 SAAL1Q96ER3 474 aa3.39□□□□□ -1.87
OTUD4-207ENST00000509517 SLC25A33Q9BSK2 321 aa3.39□□□□□ -1.87
OTUD4-207ENST00000509517 H2AFJQ9BTM1 129 aa3.39□□□□□ -1.87
OTUD4-207ENST00000509517 SLC26A6Q9BXS9 759 aa3.39□□□□□ -1.87
OTUD4-207ENST00000509517 UNC45AQ9H3U1 944 aa3.39□□□□□ -1.87
OTUD4-207ENST00000509517 PLEKHA4Q9H4M7 779 aa3.39□□□□□ -1.87
OTUD4-207ENST00000509517 TAS2R10Q9NYW0 307 aa3.39□□□□□ -1.87
OTUD4-207ENST00000509517 CISD1Q9NZ45 108 aaKnown RBP3.39□□□□□ -1.87
OTUD4-207ENST00000509517 PAM16Q9Y3D7 125 aa3.39□□□□□ -1.87
OTUD4-207ENST00000509517 NFE2L3Q9Y4A8 694 aa3.39□□□□□ -1.87
OTUD4-207ENST00000509517 LSM4Q9Y4Z0 139 aaKnown RBP3.39□□□□□ -1.87
OTUD4-207ENST00000509517 IGLV5-52A0A0A0MRZ9 124 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 A0A0U1RQJ8 604 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 A0A1W2PPH5 198 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 LINC01553A4QN01 128 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 HSPA12AO43301 675 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 SLC28A2O43868 658 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 SERPINI2O75830 405 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 MTA2O94776 668 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 SEC31AO94979 1220 aaKnown RBP3.38□□□□□ -1.87
OTUD4-207ENST00000509517 CH25HO95992 272 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 HOXB5P09067 269 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 ZNF12P17014 697 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 TNFRSF8P28908 595 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 SHMT1P34896 483 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 KRT9P35527 623 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 CPOXP36551 454 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 CTCFP49711 727 aaPredicted RBP3.38□□□□□ -1.87
OTUD4-207ENST00000509517 EIF3BP55884 814 aaKnown RBP3.38□□□□□ -1.87
OTUD4-207ENST00000509517 MPP1Q00013 466 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 TRAF2Q12933 501 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 ITGADQ13349 1161 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 LCTLQ6UWM7 567 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 CLEC4GQ6UXB4 293 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 R3HCC1LQ7Z5L2 792 aaKnown RBP3.38□□□□□ -1.87
OTUD4-207ENST00000509517 ZCCHC9Q8N567 271 aaKnown RBP3.38□□□□□ -1.87
OTUD4-207ENST00000509517 RFFLQ8WZ73 363 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 PABPC5Q96DU9 382 aaKnown RBP3.38□□□□□ -1.87
OTUD4-207ENST00000509517 MED30Q96HR3 178 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 LRFN5Q96NI6 719 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 TKTL2Q9H0I9 626 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 MAGEE1Q9HCI5 957 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 BPIFA1Q9NP55 256 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 PCDHB16Q9NRJ7 776 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 SELENONQ9NZV5 590 aa3.38□□□□□ -1.87
OTUD4-207ENST00000509517 NPIPB15A6NHN6 443 aaPredicted RBP3.37□□□□□ -1.87
OTUD4-207ENST00000509517 TTC36A6NLP5 189 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 LRRC53A6NM62 1247 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 USP17L23D6RBM5 183 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 SNAP23O00161 211 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 TGFB1I1O43294 461 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 RTN3O95197 1032 aaPredicted RBP3.37□□□□□ -1.87
OTUD4-207ENST00000509517 TBX18O95935 607 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 UBL4AP11441 157 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 FCGR1AP12314 374 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 CD58P19256 250 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 GPTP24298 496 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 CDAP32320 146 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 ICAM3P32942 547 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 COMPP49747 757 aaPredicted RBP3.37□□□□□ -1.87
OTUD4-207ENST00000509517 GNAQP50148 359 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 PDLIM4P50479 330 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 DSCR9P59020 149 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 SEC61A1P61619 476 aaKnown RBP3.37□□□□□ -1.87
OTUD4-207ENST00000509517 FOXD4Q12950 439 aaPredicted RBP3.37□□□□□ -1.87
OTUD4-207ENST00000509517 SIM2Q14190 667 aaPredicted RBP3.37□□□□□ -1.87
OTUD4-207ENST00000509517 EFNB3Q15768 340 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 HLFQ16534 295 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 TSTQ16762 297 aaKnown RBP3.37□□□□□ -1.87
OTUD4-207ENST00000509517 ALG11Q2TAA5 492 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 MMEL1Q495T6 779 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 FAM69BQ5VUD6 431 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 ANKRD54Q6NXT1 300 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 FBXO46Q6PJ61 603 aaPredicted RBP3.37□□□□□ -1.87
OTUD4-207ENST00000509517 NEK10Q6ZWH5 1172 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 MTSS1LQ765P7 747 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 LINGO2Q7L985 606 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 RBM23Q86U06 439 aaKnown RBP3.37□□□□□ -1.87
OTUD4-207ENST00000509517 CNTROBQ8N137 903 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 ZBTB2Q8N680 514 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 PAF1Q8N7H5 531 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 SCCPDHQ8NBX0 429 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 BEST2Q8NFU1 509 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 METTL6Q8TCB7 284 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 TMED6Q8WW62 240 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 ZNF570Q96NI8 536 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 FIZ1Q96SL8 496 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 PIP5K1AQ99755 562 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 KRTAP4-3Q9BYR4 195 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 CD93Q9NPY3 652 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 SLC6A13Q9NSD5 602 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 ZNF69Q9UC07 566 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 INTS6Q9UL03 887 aaKnown RBP3.37□□□□□ -1.87
OTUD4-207ENST00000509517 CDC14AQ9UNH5 594 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 CAPN7Q9Y6W3 813 aa3.37□□□□□ -1.87
OTUD4-207ENST00000509517 CPED1A4D0V7 1026 aa3.36□□□□□ -1.87
OTUD4-207ENST00000509517 TMEM202A6NGA9 273 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms