RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 NR1H4Q96RI1 486 aaPredicted RBP7.18□□□□□ -1.26
CHD1-205ENST00000508756 POLR3GLQ9BT43 218 aa7.18□□□□□ -1.26
CHD1-205ENST00000508756 H2AFJQ9BTM1 129 aa7.18□□□□□ -1.26
CHD1-205ENST00000508756 SLCO5A1Q9H2Y9 848 aa7.18□□□□□ -1.26
CHD1-205ENST00000508756 PLEKHA4Q9H4M7 779 aa7.18□□□□□ -1.26
CHD1-205ENST00000508756 PREBQ9HCU5 417 aa7.18□□□□□ -1.26
CHD1-205ENST00000508756 SLC9A2Q9UBY0 812 aa7.18□□□□□ -1.26
CHD1-205ENST00000508756 hDV102S1A0JD36 115 aa7.17□□□□□ -1.26
CHD1-205ENST00000508756 TAF4O00268 1085 aa7.17□□□□□ -1.26
CHD1-205ENST00000508756 WNT9BO14905 357 aa7.17□□□□□ -1.26
CHD1-205ENST00000508756 PPP1R3DO95685 299 aa7.17□□□□□ -1.26
CHD1-205ENST00000508756 FGF3P11487 239 aaPredicted RBP7.17□□□□□ -1.26
CHD1-205ENST00000508756 CTCFP49711 727 aaPredicted RBP7.17□□□□□ -1.26
CHD1-205ENST00000508756 MYBPHQ13203 477 aa7.17□□□□□ -1.26
CHD1-205ENST00000508756 G3BP1Q13283 466 aaKnown RBP eCLIP7.17□□□□□ -1.26
CHD1-205ENST00000508756 B3GNT6Q6ZMB0 384 aa7.17□□□□□ -1.26
CHD1-205ENST00000508756 CNTROBQ8N137 903 aa7.17□□□□□ -1.26
CHD1-205ENST00000508756 SCCPDHQ8NBX0 429 aa7.17□□□□□ -1.26
CHD1-205ENST00000508756 NAXEQ8NCW5 288 aa7.17□□□□□ -1.26
CHD1-205ENST00000508756 C6orf106Q9H6K1 298 aaPredicted RBP7.17□□□□□ -1.26
CHD1-205ENST00000508756 NOX4Q9NPH5 578 aa7.17□□□□□ -1.26
CHD1-205ENST00000508756 HOXB6P17509 224 aaKnown RBP7.16□□□□□ -1.26
CHD1-205ENST00000508756 HNRNPH1P31943 449 aaKnown RBP7.16□□□□□ -1.26
CHD1-205ENST00000508756 ART1P52961 327 aa7.16□□□□□ -1.26
CHD1-205ENST00000508756 CASP6P55212 293 aa7.16□□□□□ -1.26
CHD1-205ENST00000508756 TUBA1BP68363 451 aa7.16□□□□□ -1.26
CHD1-205ENST00000508756 IZUMO4Q1ZYL8 232 aa7.16□□□□□ -1.26
CHD1-205ENST00000508756 SETMARQ53H47 684 aaPredicted RBP7.16□□□□□ -1.26
CHD1-205ENST00000508756 JAKMIP3Q5VZ66 844 aa7.16□□□□□ -1.26
CHD1-205ENST00000508756 INO80CQ6PI98 192 aaPredicted RBP7.16□□□□□ -1.26
CHD1-205ENST00000508756 PRSS57Q6UWY2 283 aa7.16□□□□□ -1.26
CHD1-205ENST00000508756 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.16□□□□□ -1.26
CHD1-205ENST00000508756 NEK10Q6ZWH5 1172 aa7.16□□□□□ -1.26
CHD1-205ENST00000508756 MTSS1LQ765P7 747 aa7.16□□□□□ -1.26
CHD1-205ENST00000508756 BHLHA9Q7RTU4 235 aa7.16□□□□□ -1.26
CHD1-205ENST00000508756 ARMC9Q7Z3E5 817 aa7.16□□□□□ -1.26
CHD1-205ENST00000508756 ZBTB2Q8N680 514 aa7.16□□□□□ -1.26
CHD1-205ENST00000508756 BEST2Q8NFU1 509 aa7.16□□□□□ -1.26
CHD1-205ENST00000508756 LMO3Q8TAP4 145 aa7.16□□□□□ -1.26
CHD1-205ENST00000508756 SAAL1Q96ER3 474 aa7.16□□□□□ -1.26
CHD1-205ENST00000508756 PPM1MQ96MI6 270 aa7.16□□□□□ -1.26
CHD1-205ENST00000508756 CTAGE1Q96RT6 745 aa7.16□□□□□ -1.26
CHD1-205ENST00000508756 ESRP2Q9H6T0 727 aaKnown RBP7.16□□□□□ -1.26
CHD1-205ENST00000508756 JMJD4Q9H9V9 463 aa7.16□□□□□ -1.26
CHD1-205ENST00000508756 KDM3AQ9Y4C1 1321 aa7.16□□□□□ -1.26
CHD1-205ENST00000508756 CPED1A4D0V7 1026 aa7.15□□□□□ -1.26
CHD1-205ENST00000508756 SEC14L5O43304 696 aa7.15□□□□□ -1.26
CHD1-205ENST00000508756 CYC1P08574 325 aa7.15□□□□□ -1.26
CHD1-205ENST00000508756 TGFB3P10600 412 aa7.15□□□□□ -1.26
CHD1-205ENST00000508756 CD58P19256 250 aa7.15□□□□□ -1.26
CHD1-205ENST00000508756 GPTP24298 496 aa7.15□□□□□ -1.26
CHD1-205ENST00000508756 CPOXP36551 454 aa7.15□□□□□ -1.26
CHD1-205ENST00000508756 ARL1P40616 181 aaPredicted RBP7.15□□□□□ -1.26
CHD1-205ENST00000508756 EIF2S3P41091 472 aaKnown RBP7.15□□□□□ -1.26
CHD1-205ENST00000508756 NEDD9Q14511 834 aa7.15□□□□□ -1.26
CHD1-205ENST00000508756 C2orf68Q2NKX9 166 aa7.15□□□□□ -1.26
CHD1-205ENST00000508756 ALG11Q2TAA5 492 aa7.15□□□□□ -1.26
CHD1-205ENST00000508756 PAPPA-AS1Q5QFB9 102 aa7.15□□□□□ -1.26
CHD1-205ENST00000508756 C9orf57Q5W0N0 161 aa7.15□□□□□ -1.26
CHD1-205ENST00000508756 CAPRIN2Q6IMN6 1127 aaKnown RBP7.15□□□□□ -1.26
CHD1-205ENST00000508756 RHBDF2Q6PJF5 856 aa7.15□□□□□ -1.26
CHD1-205ENST00000508756 QSOX2Q6ZRP7 698 aa7.15□□□□□ -1.26
CHD1-205ENST00000508756 C16orf82Q7Z2V1 217 aa7.15□□□□□ -1.26
CHD1-205ENST00000508756 R3HCC1LQ7Z5L2 792 aaKnown RBP7.15□□□□□ -1.26
CHD1-205ENST00000508756 ZNF114Q8NC26 417 aa7.15□□□□□ -1.26
CHD1-205ENST00000508756 AGBL3Q8NEM8 1001 aa7.15□□□□□ -1.26
CHD1-205ENST00000508756 HUS1BQ8NHY5 278 aa7.15□□□□□ -1.26
CHD1-205ENST00000508756 RTP4Q96DX8 246 aa7.15□□□□□ -1.26
CHD1-205ENST00000508756 CSF3RQ99062 836 aa7.15□□□□□ -1.26
CHD1-205ENST00000508756 MMTAG2Q9BU76 263 aaKnown RBP7.15□□□□□ -1.26
CHD1-205ENST00000508756 BRF2Q9HAW0 419 aa7.15□□□□□ -1.26
CHD1-205ENST00000508756 MKKSQ9NPJ1 570 aaPredicted RBP7.15□□□□□ -1.26
CHD1-205ENST00000508756 PCDHGB1Q9Y5G3 927 aa7.15□□□□□ -1.26
CHD1-205ENST00000508756 STON1Q9Y6Q2 735 aa7.15□□□□□ -1.26
CHD1-205ENST00000508756 NDUFS7O75251 213 aa7.14□□□□□ -1.27
CHD1-205ENST00000508756 IGHV4-30-4P0DP06 118 aa7.14□□□□□ -1.27
CHD1-205ENST00000508756 G6PDP11413 515 aa7.14□□□□□ -1.27
CHD1-205ENST00000508756 GABRB2P47870 512 aa7.14□□□□□ -1.27
CHD1-205ENST00000508756 COL28A1Q2UY09 1125 aa7.14□□□□□ -1.27
CHD1-205ENST00000508756 LINGO2Q7L985 606 aa7.14□□□□□ -1.27
CHD1-205ENST00000508756 CERS3Q8IU89 383 aa7.14□□□□□ -1.27
CHD1-205ENST00000508756 CREB3L4Q8TEY5 395 aa7.14□□□□□ -1.27
CHD1-205ENST00000508756 SCMH1Q96GD3 660 aa7.14□□□□□ -1.27
CHD1-205ENST00000508756 HAUS8Q9BT25 410 aa7.14□□□□□ -1.27
CHD1-205ENST00000508756 SLCO3A1Q9UIG8 710 aa7.14□□□□□ -1.27
CHD1-205ENST00000508756 FBXO9Q9UK97 447 aaPredicted RBP7.14□□□□□ -1.27
CHD1-205ENST00000508756 RCOR1Q9UKL0 485 aa7.14□□□□□ -1.27
CHD1-205ENST00000508756 MKLN1Q9UL63 735 aa7.14□□□□□ -1.27
CHD1-205ENST00000508756 PROCRQ9UNN8 238 aa7.14□□□□□ -1.27
CHD1-205ENST00000508756 TMEM98Q9Y2Y6 226 aa7.14□□□□□ -1.27
CHD1-205ENST00000508756 CAPN7Q9Y6W3 813 aa7.14□□□□□ -1.27
CHD1-205ENST00000508756 IGLV5-37A0A075B6J1 123 aa7.13□□□□□ -1.27
CHD1-205ENST00000508756 TMEM202A6NGA9 273 aa7.13□□□□□ -1.27
CHD1-205ENST00000508756 ACOT8O14734 319 aa7.13□□□□□ -1.27
CHD1-205ENST00000508756 AFPP02771 609 aaKnown RBP7.13□□□□□ -1.27
CHD1-205ENST00000508756 EIF3BP55884 814 aaKnown RBP7.13□□□□□ -1.27
CHD1-205ENST00000508756 SORDQ00796 357 aa7.13□□□□□ -1.27
CHD1-205ENST00000508756 EIF2S3LQ2VIR3 472 aaKnown RBP7.13□□□□□ -1.27
CHD1-205ENST00000508756 PCYOX1LQ8NBM8 494 aa7.13□□□□□ -1.27
CHD1-205ENST00000508756 LILRB1Q8NHL6 650 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms