RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 SPTA1P02549 2419 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 LAMA5O15230 3695 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 SPTY2D1-AS1A0A0U1RR47 76 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 TSPAN11A1L157 253 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 POM121BA6NF01 834 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 IGLON5A6NGN9 336 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 ARHGAP42A6NI28 874 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 A6NNZ2 444 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 H3BM21 787 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 TAF4O00268 1085 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 EEF2KO00418 725 aaKnown RBP8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 TRIM38O00635 465 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 TOR1BO14657 336 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 TERTO14746 1132 aaKnown RBP8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 RAD51BO15315 384 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 EFSO43281 561 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 PRPSAP2O60256 369 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 LRCH4O75427 683 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 PIAS2O75928 621 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 IGSF6O95976 241 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 CSF2P04141 144 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 SERPING1P05155 500 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 UGT2B4P06133 528 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 GIMD1P0DJR0 217 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 SKILP12757 684 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 NME1P15531 152 aaKnown RBP8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 ACP1P24666 158 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 RABIFP47224 123 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 ACADVLP49748 655 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 UBASH3AP57075 661 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 CLDN2P57739 230 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 PFN3P60673 137 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 RHOAP61586 193 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 ZBED6P86452 979 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 NSUN2Q08J23 767 aaKnown RBP eCLIP8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 DPYSQ14117 519 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 FZD2Q14332 565 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 DPYSL2Q16555 572 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 CA9Q16790 459 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 ATXN7L2Q5T6C5 722 aaPredicted RBP8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 LEKR1Q6ZMV7 388 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 TTC7BQ86TV6 843 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 LUZP1Q86V48 1076 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 PROSER1Q86XN7 944 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 DNAAF5Q86Y56 855 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 LZTR1Q8N653 840 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 NIPA2Q8N8Q9 360 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 OR4C6Q8NH72 309 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 RFFLQ8WZ73 363 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 KLHL32Q96NJ5 620 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 TUBGCP5Q96RT8 1024 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 SNRNP25Q9BV90 132 aaKnown RBP8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 TRIM7Q9C029 511 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 SLC39A8Q9C0K1 460 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 DHX35Q9H5Z1 703 aaKnown RBP8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 LHX3Q9UBR4 397 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 UBA2Q9UBT2 640 aaPredicted RBP8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 PCSK1NQ9UHG2 260 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 CSNK1G3Q9Y6M4 447 aa8.04□□□□□ -1.12
UBE2D3-222ENST00000508238 ANKRD36A6QL64 1941 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 KIF26BQ2KJY2 2108 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 WDFY3Q8IZQ1 3526 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 CFAP69A5D8W1 941 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 TRABD2BA6NFA1 517 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 NEMP2A6NFY4 417 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 J3KR12 359 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 NEMP1O14524 444 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 FPGTO14772 594 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 SCAMP1O15126 338 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 SIGLEC6O43699 453 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 RFPL3O75679 317 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 WFS1O76024 890 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 EPB42P16452 691 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 ERCC2P18074 760 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 GRNP28799 593 aaKnown RBP8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 HNRNPH3P31942 346 aaKnown RBP8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 PAPOLAP51003 745 aaKnown RBP8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 HNRNPKP61978 463 aaKnown RBP eCLIP8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 YPEL5P62699 121 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 E2F1Q01094 437 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 IL10RBQ08334 325 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 ELP6Q0PNE2 266 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 DNAJC3Q13217 504 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 PIGHQ14442 188 aaPredicted RBP8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 RFTN1Q14699 578 aaPredicted RBP8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 UGP2Q16851 508 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 TMEM52BQ4KMG9 183 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 BRAT1Q6PJG6 821 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 DHRS13Q6UX07 377 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 VPS36Q86VN1 386 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 ZNF354CQ86Y25 554 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 ARHGAP12Q8IWW6 846 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 FAM181AQ8N9Y4 354 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 ZNF653Q96CK0 615 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 TBATAQ96M53 351 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 PSKH2Q96QS6 385 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 C1QTNF7Q9BXJ2 289 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 SUV39H2Q9H5I1 410 aa8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 CCDC86Q9H6F5 360 aaKnown RBP8.03□□□□□ -1.12
UBE2D3-222ENST00000508238 USP29Q9HBJ7 922 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms