RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 POU6F1Q14863 301 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 FAM153CQ494X1 144 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 HP1BP3Q5SSJ5 553 aaPredicted RBP20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 MPP5Q8N3R9 675 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 HDDC3Q8N4P3 179 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 BLOC1S5Q8TDH9 187 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 SIGLEC10Q96LC7 697 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 PABPC3Q9H361 631 aaKnown RBP20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 MAGEE1Q9HCI5 957 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 SPO11Q9Y5K1 396 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 A0A1W2PP55 124 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 A8MX80 341 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 E7ESA3 106 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 ADRB3P13945 408 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 NEK3P51956 506 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 SEMG2Q02383 582 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 CBLBQ13191 982 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 KIAA1324Q6UXG2 1013 aaKnown RBP20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 USP45Q70EL2 814 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 TSTD1Q8NFU3 115 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.48■□□□□ 0.872e-12■■■■■ 54.4
CDC42SE2-206ENST00000503291 HHIPQ96QV1 700 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 MCCC1Q96RQ3 725 aaPredicted RBP20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 IL22Q9GZX6 179 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 TSPYL1Q9H0U9 437 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 PCDH12Q9NPG4 1184 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 FBXL12Q9NXK8 326 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 SERGEFQ9UGK8 458 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 SCML1Q9UN30 329 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 A0A0U1RQS6 177 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 CAPN8A6NHC0 703 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 MAGEA9P43362 315 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 CLCN5P51795 746 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 FAM193AP78312 1265 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 DNAJC21Q5F1R6 531 aaKnown RBP20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 ANO7Q6IWH7 933 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 PGBD3Q8N328 593 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 OMDQ99983 421 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 IER2Q9BTL4 223 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 SYBUQ9NX95 663 aa20.48■□□□□ 0.87
CDC42SE2-206ENST00000503291 NPIPB15A6NHN6 443 aaPredicted RBP20.47■□□□□ 0.87
CDC42SE2-206ENST00000503291 RNASEH2AO75792 299 aaKnown RBP20.47■□□□□ 0.87
CDC42SE2-206ENST00000503291 ACADMP11310 421 aa20.47■□□□□ 0.87
CDC42SE2-206ENST00000503291 CXCL12P48061 93 aa20.47■□□□□ 0.87
CDC42SE2-206ENST00000503291 CCDC38Q502W7 563 aa20.47■□□□□ 0.87
CDC42SE2-206ENST00000503291 PIP5KL1Q5T9C9 394 aa20.47■□□□□ 0.87
CDC42SE2-206ENST00000503291 MDGA1Q8NFP4 955 aa20.47■□□□□ 0.87
CDC42SE2-206ENST00000503291 BRSK1Q8TDC3 778 aa20.47■□□□□ 0.87
CDC42SE2-206ENST00000503291 GANCQ8TET4 914 aa20.47■□□□□ 0.87
CDC42SE2-206ENST00000503291 LYSMD1Q96S90 227 aa20.47■□□□□ 0.87
CDC42SE2-206ENST00000503291 SAYSD1Q9NPB0 183 aa20.47■□□□□ 0.87
CDC42SE2-206ENST00000503291 BCCIPQ9P287 314 aaKnown RBP eCLIP20.47■□□□□ 0.87
CDC42SE2-206ENST00000503291 AURKAO14965 403 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 EIF3HO15372 352 aaKnown RBP eCLIP20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 ALDH1A2O94788 518 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 ELK3P41970 407 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 FASTKD3Q14CZ7 662 aaKnown RBP20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 TTC31Q49AM3 519 aaPredicted RBP20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 CASC4Q6P4E1 433 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 ZBED8Q8IZ13 594 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 SRPK1Q96SB4 655 aaKnown RBP20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 PHACTR1Q9C0D0 580 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 HACD3Q9P035 362 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 B4GALT6Q9UBX8 382 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 MAD1L1Q9Y6D9 718 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 TEX264Q9Y6I9 313 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 NFKBIAP25963 317 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 SUOXP51687 545 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 CCDC15Q0P6D6 951 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 CDKN3Q16667 212 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 PCID2Q5JVF3 399 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 AGBL4Q5VU57 503 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 ERAP2Q6P179 960 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 CRTC1Q6UUV9 634 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 MAMSTRQ6ZN01 415 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 ANKMY2Q8IV38 441 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 IGDCC3Q8IVU1 814 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 RAB7BQ96AH8 199 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 PBXIP1Q96AQ6 731 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 LRRC39Q96DD0 335 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 WDR83Q9BRX9 315 aaKnown RBP20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 CHRAC1Q9NRG0 131 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 EBF1Q9UH73 591 aa20.46■□□□□ 0.87
CDC42SE2-206ENST00000503291 AREL1O15033 823 aa20.45■□□□□ 0.86
CDC42SE2-206ENST00000503291 ADRA1DP25100 572 aa20.45■□□□□ 0.86
CDC42SE2-206ENST00000503291 SEPT6Q14141 434 aa20.45■□□□□ 0.86
CDC42SE2-206ENST00000503291 CEP128Q6ZU80 1094 aa20.45■□□□□ 0.86
CDC42SE2-206ENST00000503291 GLT6D1Q7Z4J2 308 aa20.45■□□□□ 0.86
CDC42SE2-206ENST00000503291 TSPAN33Q86UF1 283 aa20.45■□□□□ 0.86
CDC42SE2-206ENST00000503291 TRABDQ9H4I3 376 aa20.45■□□□□ 0.86
CDC42SE2-206ENST00000503291 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.45■□□□□ 0.862e-9■■□□□ 12.1
CDC42SE2-206ENST00000503291 SAMD15Q9P1V8 674 aa20.45■□□□□ 0.86
CDC42SE2-206ENST00000503291 ITM2BQ9Y287 266 aa20.45■□□□□ 0.86
CDC42SE2-206ENST00000503291 ZNF711Q9Y462 761 aa20.45■□□□□ 0.86
CDC42SE2-206ENST00000503291 ARL5AQ9Y689 179 aa20.45■□□□□ 0.86
CDC42SE2-206ENST00000503291 C1orf232A0A0U1RR37 186 aa20.44■□□□□ 0.86
CDC42SE2-206ENST00000503291 MAGEB16A2A368 324 aa20.44■□□□□ 0.86
CDC42SE2-206ENST00000503291 HEATR9A2RTY3 570 aa20.44■□□□□ 0.86
CDC42SE2-206ENST00000503291 SPINT1O43278 529 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms