RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 CSRP2Q16527 193 aa20.16■□□□□ 0.82
CTSD-206ENST00000497544 UGP2Q16851 508 aa20.16■□□□□ 0.82
CTSD-206ENST00000497544 FAXCQ5TGI0 409 aa20.16■□□□□ 0.82
CTSD-206ENST00000497544 IPMKQ8NFU5 416 aa20.16■□□□□ 0.82
CTSD-206ENST00000497544 OR14C36Q8NHC7 312 aa20.16■□□□□ 0.82
CTSD-206ENST00000497544 RAB7BQ96AH8 199 aa20.16■□□□□ 0.82
CTSD-206ENST00000497544 FSD1LQ9BXM9 530 aa20.16■□□□□ 0.82
CTSD-206ENST00000497544 ADGRE3Q9BY15 652 aa20.16■□□□□ 0.82
CTSD-206ENST00000497544 ETNK1Q9HBU6 452 aa20.16■□□□□ 0.82
CTSD-206ENST00000497544 SGK2Q9HBY8 427 aa20.16■□□□□ 0.82
CTSD-206ENST00000497544 CD93Q9NPY3 652 aa20.16■□□□□ 0.82
CTSD-206ENST00000497544 SERGEFQ9UGK8 458 aa20.16■□□□□ 0.82
CTSD-206ENST00000497544 SMG1Q96Q15 3661 aaKnown RBP20.15■□□□□ 0.82
CTSD-206ENST00000497544 CTAGE15A4D2H0 777 aa20.15■□□□□ 0.82
CTSD-206ENST00000497544 UPK3BL1B0FP48 263 aa20.15■□□□□ 0.82
CTSD-206ENST00000497544 UPK3BL2E5RIL1 263 aa20.15■□□□□ 0.82
CTSD-206ENST00000497544 MAP3K13O43283 966 aa20.15■□□□□ 0.82
CTSD-206ENST00000497544 NDUFS2O75306 463 aa20.15■□□□□ 0.82
CTSD-206ENST00000497544 IGLV3-19P01714 112 aa20.15■□□□□ 0.82
CTSD-206ENST00000497544 PDHA1P08559 390 aa20.15■□□□□ 0.82
CTSD-206ENST00000497544 CTAGE8P0CG41 777 aa20.15■□□□□ 0.82
CTSD-206ENST00000497544 CD6P30203 668 aa20.15■□□□□ 0.82
CTSD-206ENST00000497544 PTGIRP43119 386 aa20.15■□□□□ 0.82
CTSD-206ENST00000497544 SUOXP51687 545 aa20.15■□□□□ 0.82
CTSD-206ENST00000497544 RPL26P61254 145 aaKnown RBP20.15■□□□□ 0.82
CTSD-206ENST00000497544 DR1Q01658 176 aa20.15■□□□□ 0.82
CTSD-206ENST00000497544 GPS1Q13098 491 aa20.15■□□□□ 0.82
CTSD-206ENST00000497544 DHX34Q14147 1143 aaKnown RBP20.15■□□□□ 0.82
CTSD-206ENST00000497544 MAP7D1Q3KQU3 841 aa20.15■□□□□ 0.82
CTSD-206ENST00000497544 KDELC1Q6UW63 502 aa20.15■□□□□ 0.82
CTSD-206ENST00000497544 SYDE1Q6ZW31 735 aaPredicted RBP20.15■□□□□ 0.82
CTSD-206ENST00000497544 CTAGE6Q86UF2 777 aa20.15■□□□□ 0.82
CTSD-206ENST00000497544 CTAGE4Q8IX94 777 aa20.15■□□□□ 0.82
CTSD-206ENST00000497544 CEP112Q8N8E3 955 aa20.15■□□□□ 0.82
CTSD-206ENST00000497544 CCHCR1Q8TD31 782 aa20.15■□□□□ 0.82
CTSD-206ENST00000497544 SLCO2A1Q92959 643 aa20.15■□□□□ 0.82
CTSD-206ENST00000497544 MLPHQ9BV36 600 aaPredicted RBP20.15■□□□□ 0.82
CTSD-206ENST00000497544 WSB2Q9NYS7 404 aaPredicted RBP20.15■□□□□ 0.82
CTSD-206ENST00000497544 RPL26L1Q9UNX3 145 aaKnown RBP20.15■□□□□ 0.82
CTSD-206ENST00000497544 EML5Q05BV3 1969 aa20.14■□□□□ 0.81
CTSD-206ENST00000497544 IGHV1OR15-9A0A0B4J2B8 117 aa20.14■□□□□ 0.81
CTSD-206ENST00000497544 FAM47DPA6NHR8 397 aa20.14■□□□□ 0.81
CTSD-206ENST00000497544 SRRM3A6NNA2 597 aaPredicted RBP20.14■□□□□ 0.81
CTSD-206ENST00000497544 NEMP1O14524 444 aa20.14■□□□□ 0.81
CTSD-206ENST00000497544 TM4SF5O14894 197 aa20.14■□□□□ 0.81
CTSD-206ENST00000497544 FZD6O60353 706 aa20.14■□□□□ 0.81
CTSD-206ENST00000497544 NDST3O95803 873 aa20.14■□□□□ 0.81
CTSD-206ENST00000497544 PRLP01236 227 aa20.14■□□□□ 0.81
CTSD-206ENST00000497544 EPOP01588 193 aa20.14■□□□□ 0.81
CTSD-206ENST00000497544 BASP1P80723 227 aaKnown RBP20.14■□□□□ 0.81
CTSD-206ENST00000497544 PIP5KL1Q5T9C9 394 aa20.14■□□□□ 0.81
CTSD-206ENST00000497544 AGBL4Q5VU57 503 aa20.14■□□□□ 0.81
CTSD-206ENST00000497544 ERAP2Q6P179 960 aa20.14■□□□□ 0.81
CTSD-206ENST00000497544 SLC36A4Q6YBV0 504 aa20.14■□□□□ 0.81
CTSD-206ENST00000497544 MAATS1Q7Z4T9 603 aa20.14■□□□□ 0.81
CTSD-206ENST00000497544 ZSWIM9Q86XI8 627 aa20.14■□□□□ 0.81
CTSD-206ENST00000497544 PDCD7Q8N8D1 485 aaKnown RBP20.14■□□□□ 0.81
CTSD-206ENST00000497544 LPCAT1Q8NF37 534 aa20.14■□□□□ 0.81
CTSD-206ENST00000497544 PIH1D2Q8WWB5 315 aa20.14■□□□□ 0.81
CTSD-206ENST00000497544 TOE1Q96GM8 510 aaKnown RBP20.14■□□□□ 0.81
CTSD-206ENST00000497544 FEM1CQ96JP0 617 aa20.14■□□□□ 0.81
CTSD-206ENST00000497544 MRGPRX2Q96LB1 330 aa20.14■□□□□ 0.81
CTSD-206ENST00000497544 GORASP1Q9BQQ3 440 aa20.14■□□□□ 0.81
CTSD-206ENST00000497544 MAST4O15021 2626 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 TBC1D3DA0A087WVF3 549 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 TBC1D3IA0A087WXS9 549 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 TBC1D3EA0A087X179 549 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 TBC1D3KA0A087X1G2 549 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 TBC1D3FA6NER0 549 aaPredicted RBP20.13■□□□□ 0.81
CTSD-206ENST00000497544 ANKRD66B4E2M5 251 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 TBC1D3LB9A6J9 549 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 RPP40O75818 363 aaKnown RBP20.13■□□□□ 0.81
CTSD-206ENST00000497544 PCDH8O95206 1070 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 TBC1D3HP0C7X1 549 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 ACSL1P33121 698 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 CNR2P34972 360 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 ABL2P42684 1182 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 FAM193AP78312 1265 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 ELP6Q0PNE2 266 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 KCTD19Q17RG1 926 aaPredicted RBP20.13■□□□□ 0.81
CTSD-206ENST00000497544 TBC1D3GQ6DHY5 549 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 TBC1D3CQ6IPX1 549 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 JAMLQ86YT9 394 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 TBC1D3Q8IZP1 549 aaPredicted RBP20.13■□□□□ 0.81
CTSD-206ENST00000497544 ABCA7Q8IZY2 2146 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 FAM160A2Q8N612 972 aaPredicted RBP20.13■□□□□ 0.81
CTSD-206ENST00000497544 FRMD1Q8N878 549 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 SPOCK2Q92563 424 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 FAM131CQ96AQ9 280 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 FICDQ9BVA6 458 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 TMEM121BQ9BXQ6 578 aaPredicted RBP20.13■□□□□ 0.81
CTSD-206ENST00000497544 KDM4CQ9H3R0 1056 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 PCDH12Q9NPG4 1184 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 ASIC3Q9UHC3 531 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 NEU2Q9Y3R4 380 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 FADS3Q9Y5Q0 445 aa20.13■□□□□ 0.81
CTSD-206ENST00000497544 AKAP13Q12802 2813 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.12■□□□□ 0.81
CTSD-206ENST00000497544 LOC285095A0A1B0GVY8 99 aa20.12■□□□□ 0.81
CTSD-206ENST00000497544 FAM187AA6NFU0 413 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms