RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 POM121BA6NF01 834 aa17.22■□□□□ 0.35
SNX17-209ENST00000494893 APOC4-APOC2K7ER74 178 aa17.22■□□□□ 0.35
SNX17-209ENST00000494893 TLR4O00206 839 aa17.22■□□□□ 0.35
SNX17-209ENST00000494893 PGLSO95336 258 aa17.22■□□□□ 0.35
SNX17-209ENST00000494893 CPP00450 1065 aa17.22■□□□□ 0.35
SNX17-209ENST00000494893 PRLP01236 227 aa17.22■□□□□ 0.35
SNX17-209ENST00000494893 APOC2P02655 101 aa17.22■□□□□ 0.35
SNX17-209ENST00000494893 CD59P13987 128 aa17.22■□□□□ 0.35
SNX17-209ENST00000494893 TCP1P17987 556 aaKnown RBP17.22■□□□□ 0.35
SNX17-209ENST00000494893 XPAP23025 273 aaPredicted RBP17.22■□□□□ 0.35
SNX17-209ENST00000494893 PTPN3P26045 913 aa17.22■□□□□ 0.35
SNX17-209ENST00000494893 ATXN3P54252 364 aaPredicted RBP17.22■□□□□ 0.35
SNX17-209ENST00000494893 SKOR1P84550 965 aa17.22■□□□□ 0.35
SNX17-209ENST00000494893 ELP6Q0PNE2 266 aa17.22■□□□□ 0.35
SNX17-209ENST00000494893 TUBB2AQ13885 445 aa17.22■□□□□ 0.35
SNX17-209ENST00000494893 PUM1Q14671 1186 aaKnown RBP eCLIP17.22■□□□□ 0.35
SNX17-209ENST00000494893 NOMO1Q15155 1222 aa17.22■□□□□ 0.35
SNX17-209ENST00000494893 SHBQ15464 509 aa17.22■□□□□ 0.35
SNX17-209ENST00000494893 ZNF423Q2M1K9 1284 aa17.22■□□□□ 0.35
SNX17-209ENST00000494893 CFAP58Q5T655 872 aa17.22■□□□□ 0.35
SNX17-209ENST00000494893 DPPA4Q7L190 304 aa17.22■□□□□ 0.35
SNX17-209ENST00000494893 ADAT2Q7Z6V5 191 aaKnown RBP17.22■□□□□ 0.35
SNX17-209ENST00000494893 ZC3H18Q86VM9 953 aaKnown RBP17.22■□□□□ 0.35
SNX17-209ENST00000494893 TP53I13Q8NBR0 393 aaPredicted RBP17.22■□□□□ 0.35
SNX17-209ENST00000494893 OR13H1Q8NG92 308 aa17.22■□□□□ 0.35
SNX17-209ENST00000494893 PDCD6IPQ8WUM4 868 aaKnown RBP17.22■□□□□ 0.35
SNX17-209ENST00000494893 P3H4Q92791 437 aa17.22■□□□□ 0.35
SNX17-209ENST00000494893 QKIQ96PU8 341 aaKnown RBP eCLIP17.22■□□□□ 0.359e-9■■□□□ 14.4
SNX17-209ENST00000494893 LENG8Q96PV6 779 aaPredicted RBP17.22■□□□□ 0.35
SNX17-209ENST00000494893 OSBPL9Q96SU4 736 aa17.22■□□□□ 0.35
SNX17-209ENST00000494893 TUBB2BQ9BVA1 445 aa17.22■□□□□ 0.35
SNX17-209ENST00000494893 MBNL1Q9NR56 388 aaKnown RBP17.22■□□□□ 0.35
SNX17-209ENST00000494893 SEPT10Q9P0V9 454 aa17.22■□□□□ 0.35
SNX17-209ENST00000494893 B4GALT6Q9UBX8 382 aa17.22■□□□□ 0.35
SNX17-209ENST00000494893 A0A0U1RQS6 177 aa17.21■□□□□ 0.35
SNX17-209ENST00000494893 TCRBV7S2A1N4TA0A589 114 aa17.21■□□□□ 0.35
SNX17-209ENST00000494893 C6P13671 934 aa17.21■□□□□ 0.35
SNX17-209ENST00000494893 SDHBP21912 280 aa17.21■□□□□ 0.35
SNX17-209ENST00000494893 AKT2P31751 481 aa17.21■□□□□ 0.35
SNX17-209ENST00000494893 CD68P34810 354 aaPredicted RBP17.21■□□□□ 0.35
SNX17-209ENST00000494893 IGFALSP35858 605 aa17.21■□□□□ 0.35
SNX17-209ENST00000494893 LIG3P49916 1009 aa17.21■□□□□ 0.35
SNX17-209ENST00000494893 FAM193AP78312 1265 aa17.21■□□□□ 0.35
SNX17-209ENST00000494893 OTUD4Q01804 1114 aaKnown RBP17.21■□□□□ 0.35
SNX17-209ENST00000494893 STAT4Q14765 748 aa17.21■□□□□ 0.35
SNX17-209ENST00000494893 TPRG1LQ5T0D9 272 aa17.21■□□□□ 0.35
SNX17-209ENST00000494893 LIPIQ6XZB0 460 aa17.21■□□□□ 0.35
SNX17-209ENST00000494893 IQCHQ86VS3 1027 aa17.21■□□□□ 0.35
SNX17-209ENST00000494893 ACTL9Q8TC94 416 aa17.21■□□□□ 0.35
SNX17-209ENST00000494893 CXorf40AQ8TE69 158 aa17.21■□□□□ 0.35
SNX17-209ENST00000494893 TFB1MQ8WVM0 346 aaKnown RBP17.21■□□□□ 0.35
SNX17-209ENST00000494893 TADA1Q96BN2 335 aa17.21■□□□□ 0.35
SNX17-209ENST00000494893 CENPTQ96BT3 561 aa17.21■□□□□ 0.35
SNX17-209ENST00000494893 PBKQ96KB5 322 aa17.21■□□□□ 0.35
SNX17-209ENST00000494893 AGAP3Q96P47 875 aa17.21■□□□□ 0.35
SNX17-209ENST00000494893 MCCC1Q96RQ3 725 aaPredicted RBP17.21■□□□□ 0.35
SNX17-209ENST00000494893 FAM118BQ9BPY3 351 aa17.21■□□□□ 0.35
SNX17-209ENST00000494893 TDRD1Q9BXT4 1180 aaKnown RBP17.21■□□□□ 0.35
SNX17-209ENST00000494893 GPR27Q9NS67 375 aa17.21■□□□□ 0.35
SNX17-209ENST00000494893 PPIL1Q9Y3C6 166 aa17.21■□□□□ 0.35
SNX17-209ENST00000494893 HS3ST3A1Q9Y663 406 aa17.21■□□□□ 0.35
SNX17-209ENST00000494893 A8MX80 341 aa17.2■□□□□ 0.34
SNX17-209ENST00000494893 CES2O00748 559 aa17.2■□□□□ 0.34
SNX17-209ENST00000494893 OPHN1O60890 802 aa17.2■□□□□ 0.34
SNX17-209ENST00000494893 TM7SF2O76062 418 aa17.2■□□□□ 0.34
SNX17-209ENST00000494893 LHCGRP22888 699 aa17.2■□□□□ 0.34
SNX17-209ENST00000494893 CES1P23141 567 aa17.2■□□□□ 0.34
SNX17-209ENST00000494893 CD86P42081 329 aa17.2■□□□□ 0.34
SNX17-209ENST00000494893 C21orf59P57076 290 aa17.2■□□□□ 0.34
SNX17-209ENST00000494893 SGCGQ13326 291 aa17.2■□□□□ 0.34
SNX17-209ENST00000494893 KLF1Q13351 362 aaPredicted RBP17.2■□□□□ 0.34
SNX17-209ENST00000494893 TEX44Q53QW1 395 aa17.2■□□□□ 0.34
SNX17-209ENST00000494893 ERAP2Q6P179 960 aa17.2■□□□□ 0.34
SNX17-209ENST00000494893 IL27RAQ6UWB1 636 aa17.2■□□□□ 0.34
SNX17-209ENST00000494893 BZW1Q7L1Q6 419 aaKnown RBP17.2■□□□□ 0.34
SNX17-209ENST00000494893 PIP4P1Q86T03 277 aa17.2■□□□□ 0.34
SNX17-209ENST00000494893 SLC22A18ASQ8N1D0 253 aa17.2■□□□□ 0.34
SNX17-209ENST00000494893 CBARPQ8N350 705 aaPredicted RBP17.2■□□□□ 0.34
SNX17-209ENST00000494893 DENND6BQ8NEG7 585 aa17.2■□□□□ 0.34
SNX17-209ENST00000494893 IMP4Q96G21 291 aaKnown RBP17.2■□□□□ 0.34
SNX17-209ENST00000494893 TEKT5Q96M29 485 aa17.2■□□□□ 0.34
SNX17-209ENST00000494893 CARD9Q9H257 536 aa17.2■□□□□ 0.34
SNX17-209ENST00000494893 CDC23Q9UJX2 597 aa17.2■□□□□ 0.34
SNX17-209ENST00000494893 PHTF1Q9UMS5 762 aa17.2■□□□□ 0.34
SNX17-209ENST00000494893 CHKBQ9Y259 395 aa17.2■□□□□ 0.34
SNX17-209ENST00000494893 TMEM131Q92545 1883 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 A0A1W2PQ67 120 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 NPIPB15A6NHN6 443 aaPredicted RBP17.19■□□□□ 0.34
SNX17-209ENST00000494893 CER1O95813 267 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 ALPIP09923 528 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 ZNF883P0CG24 379 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 THEGLP0DJG4 465 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 CTPS1P17812 591 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 RBL1P28749 1068 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 CXCR5P32302 372 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 PFN3P60673 137 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 POLR2LP62875 67 aaKnown RBP17.19■□□□□ 0.34
SNX17-209ENST00000494893 OVGP1Q12889 678 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 XRCC4Q13426 336 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 AGERQ15109 404 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms