RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 AVPP01185 164 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 KRT10P13645 584 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 TNNT1P13805 278 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 ITIH2P19823 946 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 MX2P20592 715 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 SDHBP21912 280 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 MPSTP25325 297 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 MAT2AP31153 395 aaKnown RBP8.84□□□□□ -0.99
ITGB1-217ENST00000494395 MMP12P39900 470 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 CTSKP43235 329 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 MMP13P45452 471 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 SCNN1BP51168 640 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 MAXP61244 160 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 AP1S1P61966 158 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 ZNF235Q14590 738 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 PUM1Q14671 1186 aaKnown RBP eCLIP8.84□□□□□ -0.99
ITGB1-217ENST00000494395 PPP2R5EQ16537 467 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 C4orf17Q53FE4 359 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 TFDP3Q5H9I0 405 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 RALGPS1Q5JS13 557 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 LRRC73Q5JTD7 316 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 ZFYVE27Q5T4F4 411 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 MARC1Q5VT66 337 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 KIAA1161Q6NSJ0 714 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 TIGD7Q6NT04 549 aaPredicted RBP8.84□□□□□ -0.99
ITGB1-217ENST00000494395 BRAT1Q6PJG6 821 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 DNAJC14Q6Y2X3 702 aaPredicted RBP8.84□□□□□ -0.99
ITGB1-217ENST00000494395 KIAA1328Q86T90 577 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 ZSCAN30Q86W11 494 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 MINDY1Q8N5J2 469 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 CCDC112Q8NEF3 446 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 EXD1Q8NHP7 514 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 ASB12Q8WXK4 309 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 SERAC1Q96JX3 654 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 LGMNQ99538 433 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 IL12RB2Q99665 862 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 HERPUD2Q9BSE4 406 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 PHACTR1Q9C0D0 580 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 ATP13A3Q9H7F0 1226 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 NOD2Q9HC29 1040 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 GPR27Q9NS67 375 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 AMACRQ9UHK6 382 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 ANKRD6Q9Y2G4 727 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 ATP8A1Q9Y2Q0 1164 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 PCDHA3Q9Y5H8 950 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 CAPN6Q9Y6Q1 641 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 CABIN1Q9Y6J0 2220 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 PCNX2A6NKB5 2137 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.83□□□□□ -1
ITGB1-217ENST00000494395 MACROD2A1Z1Q3 448 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 CCDC66A2RUB6 948 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 PRAMEF26H0Y7S4 382 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 CST8O60676 142 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 SOCS5O75159 536 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 PCDH8O95206 1070 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 ZRANB2O95218 330 aaKnown RBP eCLIP8.83□□□□□ -1
ITGB1-217ENST00000494395 HLA-DQB2P05538 268 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 SYPP08247 313 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 ZNF883P0CG24 379 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 CD59P13987 128 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 CCNB1P14635 433 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 PECAM1P16284 738 aaPredicted RBP8.83□□□□□ -1
ITGB1-217ENST00000494395 PRLRP16471 622 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 ZFXP17010 805 aaPredicted RBP8.83□□□□□ -1
ITGB1-217ENST00000494395 HNRNPA2B1P22626 353 aaKnown RBP8.83□□□□□ -1
ITGB1-217ENST00000494395 CD38P28907 300 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 SERPINA4P29622 427 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 PTPN7P35236 360 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 MAPK8P45983 427 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 SUOXP51687 545 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 RPS21P63220 83 aaKnown RBP8.83□□□□□ -1
ITGB1-217ENST00000494395 IFI35P80217 286 aaPredicted RBP8.83□□□□□ -1
ITGB1-217ENST00000494395 BCL2L1Q07817 233 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 KIF5AQ12840 1032 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 TRAF2Q12933 501 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 ZBTB17Q13105 803 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 PRKD1Q15139 912 aaPredicted RBP8.83□□□□□ -1
ITGB1-217ENST00000494395 UGP2Q16851 508 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 ZNF423Q2M1K9 1284 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 KIF19Q2TAC6 998 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 TMEM52BQ4KMG9 183 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 SETMARQ53H47 684 aaPredicted RBP8.83□□□□□ -1
ITGB1-217ENST00000494395 DBX2Q6ZNG2 339 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 GCNT7Q6ZNI0 430 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 ZNF662Q6ZS27 426 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 BBS12Q6ZW61 710 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 ABI3BPQ7Z7G0 1075 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 PIP4P1Q86T03 277 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 TTC7BQ86TV6 843 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 PRPF39Q86UA1 669 aaKnown RBP8.83□□□□□ -1
ITGB1-217ENST00000494395 IQCHQ86VS3 1027 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 SPATS2Q86XZ4 545 aaKnown RBP8.83□□□□□ -1
ITGB1-217ENST00000494395 RFX6Q8HWS3 928 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 CCDC13Q8IYE1 715 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 RCOR2Q8IZ40 523 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 CNTD1Q8N815 330 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 MFSD2AQ8NA29 543 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 ARRDC2Q8TBH0 407 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 KIAA1524Q8TCG1 905 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 KLK6Q92876 244 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms