RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 UVRAGQ9P2Y5 699 aa12.68□□□□□ -0.38
HSPG2-212ENST00000493940 TMEM202A6NGA9 273 aa12.67□□□□□ -0.38
HSPG2-212ENST00000493940 CBFA2T2O43439 604 aa12.67□□□□□ -0.38
HSPG2-212ENST00000493940 RECQL5O94762 991 aaPredicted RBP12.67□□□□□ -0.38
HSPG2-212ENST00000493940 FUCA1P04066 466 aa12.67□□□□□ -0.38
HSPG2-212ENST00000493940 LHCGRP22888 699 aa12.67□□□□□ -0.38
HSPG2-212ENST00000493940 XPAP23025 273 aaPredicted RBP12.67□□□□□ -0.38
HSPG2-212ENST00000493940 SERPINA4P29622 427 aa12.67□□□□□ -0.38
HSPG2-212ENST00000493940 GARSP41250 739 aaKnown RBP12.67□□□□□ -0.38
HSPG2-212ENST00000493940 HNRNPKP61978 463 aaKnown RBP eCLIP12.67□□□□□ -0.382e-8■■■■■ 27.6
HSPG2-212ENST00000493940 ELP6Q0PNE2 266 aa12.67□□□□□ -0.38
HSPG2-212ENST00000493940 GALNT2Q10471 571 aa12.67□□□□□ -0.38
HSPG2-212ENST00000493940 GRM3Q14832 879 aa12.67□□□□□ -0.38
HSPG2-212ENST00000493940 LRRC14Q15048 493 aa12.67□□□□□ -0.38
HSPG2-212ENST00000493940 AGERQ15109 404 aa12.67□□□□□ -0.38
HSPG2-212ENST00000493940 ALG11Q2TAA5 492 aa12.67□□□□□ -0.38
HSPG2-212ENST00000493940 B4GALNT4Q76KP1 1039 aa12.67□□□□□ -0.38
HSPG2-212ENST00000493940 TSPAN33Q86UF1 283 aa12.67□□□□□ -0.38
HSPG2-212ENST00000493940 ZSCAN30Q86W11 494 aa12.67□□□□□ -0.38
HSPG2-212ENST00000493940 GAS2L3Q86XJ1 694 aa12.67□□□□□ -0.38
HSPG2-212ENST00000493940 PHACTR4Q8IZ21 702 aa12.67□□□□□ -0.38
HSPG2-212ENST00000493940 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.67□□□□□ -0.38
HSPG2-212ENST00000493940 FAM174AQ8TBP5 190 aa12.67□□□□□ -0.38
HSPG2-212ENST00000493940 CTNNBL1Q8WYA6 563 aaPredicted RBP12.67□□□□□ -0.38
HSPG2-212ENST00000493940 LRRC61Q9BV99 259 aa12.67□□□□□ -0.38
HSPG2-212ENST00000493940 RBSNQ9H1K0 784 aa12.67□□□□□ -0.38
HSPG2-212ENST00000493940 GOLPH3Q9H4A6 298 aa12.67□□□□□ -0.38
HSPG2-212ENST00000493940 NT5MQ9NPB1 228 aa12.67□□□□□ -0.38
HSPG2-212ENST00000493940 MRPL40Q9NQ50 206 aaKnown RBP12.67□□□□□ -0.38
HSPG2-212ENST00000493940 NLGN3Q9NZ94 848 aa12.67□□□□□ -0.38
HSPG2-212ENST00000493940 RCOR3Q9P2K3 495 aaPredicted RBP12.67□□□□□ -0.38
HSPG2-212ENST00000493940 B4GALT6Q9UBX8 382 aa12.67□□□□□ -0.38
HSPG2-212ENST00000493940 AQP9O43315 295 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 AKR1B10O60218 316 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 FZD6O60353 706 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 PRLP01236 227 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 PCCBP05166 539 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 C1SP09871 688 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 ALPIP09923 528 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 CKMT1AP12532 417 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 TSHRP16473 764 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 CTPS1P17812 591 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 SUOXP51687 545 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 AP1S1P61966 158 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 YPEL5P62699 121 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 DSC2Q02487 901 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 NIPAL4Q0D2K0 466 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 TRIM14Q14142 442 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 ZNF235Q14590 738 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 CNGA3Q16281 694 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 HADHQ16836 314 aaKnown RBP12.66□□□□□ -0.38
HSPG2-212ENST00000493940 PRRT3Q5FWE3 981 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 PERM1Q5SV97 790 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 MARC1Q5VT66 337 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 GUSBP11Q6P575 273 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 ENPP7Q6UWV6 458 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 NPNTQ6UXI9 565 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 DPPA4Q7L190 304 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 HSD11B1LQ7Z5J1 315 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 TMPRSS12Q86WS5 348 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 GALNT15Q8N3T1 639 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 ATPAF2Q8N5M1 289 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 PLD5Q8N7P1 536 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 FAM181AQ8N9Y4 354 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 KCTD6Q8NC69 237 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 ARRDC2Q8TBH0 407 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 PDCD6IPQ8WUM4 868 aaKnown RBP12.66□□□□□ -0.38
HSPG2-212ENST00000493940 PTCD2Q8WV60 388 aaKnown RBP12.66□□□□□ -0.38
HSPG2-212ENST00000493940 PIH1D2Q8WWB5 315 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 MAML1Q92585 1016 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 COQ10AQ96MF6 247 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 RNF157Q96PX1 679 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 SCUBE2Q9NQ36 999 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 DTLQ9NZJ0 730 aa12.66□□□□□ -0.38
HSPG2-212ENST00000493940 PTPRQQ9UMZ3 2332 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 A0A1W2PNU3 283 aaPredicted RBP12.65□□□□□ -0.38
HSPG2-212ENST00000493940 NPIPB15A6NHN6 443 aaPredicted RBP12.65□□□□□ -0.38
HSPG2-212ENST00000493940 YY2O15391 372 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 LZTS3O60299 673 aaPredicted RBP12.65□□□□□ -0.38
HSPG2-212ENST00000493940 MTA2O94776 668 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 TPM3P06753 285 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 MMP2P08253 660 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 JUPP14923 745 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 MMP13P45452 471 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 RENBPP51606 427 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 THOP1P52888 689 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 CDKN3Q16667 212 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 FAXCQ5TGI0 409 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 CDCP2Q5VXM1 449 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 ERAP2Q6P179 960 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 SARM1Q6SZW1 724 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 CRTC1Q6UUV9 634 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 MACC1Q6ZN28 852 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 SLC35F3Q8IY50 421 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 CNTD1Q8N815 330 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 RFFLQ8WZ73 363 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 OR1E3Q8WZA6 343 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 SPOCK2Q92563 424 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 PDXPQ96GD0 296 aa12.65□□□□□ -0.38
HSPG2-212ENST00000493940 CCDC42Q96M95 316 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms