RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 PADI4Q9UM07 663 aa11.33□□□□□ -0.6
DUBR-204ENST00000490441 SATB2Q9UPW6 733 aa11.33□□□□□ -0.6
DUBR-204ENST00000490441 OR1A2Q9Y585 309 aa11.33□□□□□ -0.6
DUBR-204ENST00000490441 SCINQ9Y6U3 715 aa11.33□□□□□ -0.6
DUBR-204ENST00000490441 AHCTF1Q8WYP5 2266 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 TMEM191CA6NGB0 347 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 TK2O00142 265 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 CACNB4O00305 520 aaPredicted RBP11.32□□□□□ -0.6
DUBR-204ENST00000490441 ATXN7O15265 892 aaPredicted RBP11.32□□□□□ -0.6
DUBR-204ENST00000490441 BUB1BO60566 1050 aaPredicted RBP11.32□□□□□ -0.6
DUBR-204ENST00000490441 TNFP01375 233 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 FTLP02792 175 aaPredicted RBP11.32□□□□□ -0.6
DUBR-204ENST00000490441 PRKCGP05129 697 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 ELFN1P0C7U0 828 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 GZMAP12544 262 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 MIPP30301 263 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 CSNK1DP48730 415 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 RENBPP51606 427 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 PRSS12P56730 875 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 TMPRSS3P57727 454 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 SRP54P61011 504 aaKnown RBP11.32□□□□□ -0.6
DUBR-204ENST00000490441 POLR2LP62875 67 aaKnown RBP11.32□□□□□ -0.6
DUBR-204ENST00000490441 KLHL30Q0D2K2 578 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 MTM1Q13496 603 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 ALG11Q2TAA5 492 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 PERM1Q5SV97 790 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 FOXR1Q6PIV2 292 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 PSTKQ8IV42 348 aaKnown RBP11.32□□□□□ -0.6
DUBR-204ENST00000490441 ARL14Q8N4G2 192 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 TSEN2Q8NCE0 465 aaKnown RBP11.32□□□□□ -0.6
DUBR-204ENST00000490441 FNIP1Q8TF40 1166 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 HIC2Q96JB3 615 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 WDR92Q96MX6 357 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 PEBP4Q96S96 227 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 CCDC3Q9BQI4 270 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 SYT11Q9BT88 431 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 HAUS4Q9H6D7 363 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 ZWILCHQ9H900 591 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 MRPL47Q9HD33 250 aaKnown RBP11.32□□□□□ -0.6
DUBR-204ENST00000490441 SEPT3Q9UH03 358 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 PNMA8BQ9ULN7 279 aaPredicted RBP11.32□□□□□ -0.6
DUBR-204ENST00000490441 GPR34Q9UPC5 381 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 PCDHGA8Q9Y5G5 932 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 ENTPD2Q9Y5L3 495 aa11.32□□□□□ -0.6
DUBR-204ENST00000490441 CFAP69A5D8W1 941 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 H3BRJ5 948 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 KLK10O43240 276 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 CELA2BP08218 269 aaPredicted RBP11.31□□□□□ -0.6
DUBR-204ENST00000490441 MYBL1P10243 752 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 KELP23276 732 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 NFKBIAP25963 317 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 ARL4AP40617 200 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 RGRP47804 291 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 SCNN1BP51168 640 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 AP1S1P61966 158 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 IL10RBQ08334 325 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 NSUN2Q08J23 767 aaKnown RBP eCLIP11.31□□□□□ -0.6
DUBR-204ENST00000490441 C19orf57Q0VDD7 668 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 ZNF235Q14590 738 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 AGERQ15109 404 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 KIF26BQ2KJY2 2108 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 TMCO4Q5TGY1 634 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 IGF2-ASQ6U949 168 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 ZNF571Q7Z3V5 609 aaPredicted RBP11.31□□□□□ -0.6
DUBR-204ENST00000490441 ZSWIM9Q86XI8 627 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 LZTR1Q8N653 840 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 KYQ8NBH2 561 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 LSM14AQ8ND56 463 aaKnown RBP11.31□□□□□ -0.6
DUBR-204ENST00000490441 OR6C4Q8NGE1 309 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 WDR36Q8NI36 951 aaKnown RBP11.31□□□□□ -0.6
DUBR-204ENST00000490441 CCDC97Q96F63 343 aaPredicted RBP11.31□□□□□ -0.6
DUBR-204ENST00000490441 BPIFA3Q9BQP9 254 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 DPH1Q9BZG8 443 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 ASCL3Q9NQ33 180 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 AIPL1Q9NZN9 384 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 MYO1AQ9UBC5 1043 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 LRRK1Q38SD2 2015 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 UNC13CQ8NB66 2214 aa11.31□□□□□ -0.6
DUBR-204ENST00000490441 CCDC187A0A096LP49 1063 aa11.3□□□□□ -0.6
DUBR-204ENST00000490441 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.3□□□□□ -0.6
DUBR-204ENST00000490441 A0A1W2PQC6 194 aa11.3□□□□□ -0.6
DUBR-204ENST00000490441 TMX2-CTNND1H3BSU7 103 aa11.3□□□□□ -0.6
DUBR-204ENST00000490441 SNPHO15079 494 aa11.3□□□□□ -0.6
DUBR-204ENST00000490441 LRCH4O75427 683 aa11.3□□□□□ -0.6
DUBR-204ENST00000490441 RECQL5O94762 991 aaPredicted RBP11.3□□□□□ -0.6
DUBR-204ENST00000490441 HSPA9P38646 679 aaKnown RBP11.3□□□□□ -0.6
DUBR-204ENST00000490441 PRKCIP41743 596 aa11.3□□□□□ -0.6
DUBR-204ENST00000490441 HCAR3P49019 387 aa11.3□□□□□ -0.6
DUBR-204ENST00000490441 KIAA1024LP59773 190 aa11.3□□□□□ -0.6
DUBR-204ENST00000490441 RALGDSQ12967 914 aa11.3□□□□□ -0.6
DUBR-204ENST00000490441 LBRQ14739 615 aaKnown RBP11.3□□□□□ -0.6
DUBR-204ENST00000490441 ACOX1Q15067 660 aa11.3□□□□□ -0.6
DUBR-204ENST00000490441 TAF1BQ53T94 588 aaPredicted RBP11.3□□□□□ -0.6
DUBR-204ENST00000490441 TDRD12Q587J7 1177 aaKnown RBP11.3□□□□□ -0.6
DUBR-204ENST00000490441 AFMIDQ63HM1 303 aa11.3□□□□□ -0.6
DUBR-204ENST00000490441 ARHGAP36Q6ZRI8 547 aa11.3□□□□□ -0.6
DUBR-204ENST00000490441 DPPA4Q7L190 304 aa11.3□□□□□ -0.6
DUBR-204ENST00000490441 TAF8Q7Z7C8 310 aa11.3□□□□□ -0.6
DUBR-204ENST00000490441 ARHGAP12Q8IWW6 846 aa11.3□□□□□ -0.6
DUBR-204ENST00000490441 BBS5Q8N3I7 341 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms