RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 TMEM164Q5U3C3 297 aa8.26□□□□□ -1.09
USP39-216ENST00000490193 KCTD16Q68DU8 428 aa8.26□□□□□ -1.09
USP39-216ENST00000490193 BORAQ6PGQ7 559 aa8.26□□□□□ -1.09
USP39-216ENST00000490193 ENPP7Q6UWV6 458 aa8.26□□□□□ -1.09
USP39-216ENST00000490193 TMPRSS9Q7Z410 1059 aa8.26□□□□□ -1.09
USP39-216ENST00000490193 ZNF438Q7Z4V0 828 aa8.26□□□□□ -1.09
USP39-216ENST00000490193 C17orf82Q86X59 251 aaPredicted RBP8.26□□□□□ -1.09
USP39-216ENST00000490193 PDXPQ96GD0 296 aa8.26□□□□□ -1.09
USP39-216ENST00000490193 CFAP57Q96MR6 1250 aa8.26□□□□□ -1.09
USP39-216ENST00000490193 WRAP53Q9BUR4 548 aaKnown RBP8.26□□□□□ -1.09
USP39-216ENST00000490193 CDH19Q9H159 772 aa8.26□□□□□ -1.09
USP39-216ENST00000490193 EPN3Q9H201 632 aa8.26□□□□□ -1.09
USP39-216ENST00000490193 PLCB1Q9NQ66 1216 aa8.26□□□□□ -1.09
USP39-216ENST00000490193 WDR70Q9NW82 654 aa8.26□□□□□ -1.09
USP39-216ENST00000490193 OR12D3Q9UGF7 316 aa8.26□□□□□ -1.09
USP39-216ENST00000490193 ANAPC2Q9UJX6 822 aa8.26□□□□□ -1.09
USP39-216ENST00000490193 PCDHGA3Q9Y5H0 932 aa8.26□□□□□ -1.09
USP39-216ENST00000490193 RNF215Q9Y6U7 377 aa8.26□□□□□ -1.09
USP39-216ENST00000490193 ZFC3H1O60293 1989 aaKnown RBP8.26□□□□□ -1.09
USP39-216ENST00000490193 NBASA2RRP1 2371 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 NBPF19A0A087WUL8 3843 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 CFAP69A5D8W1 941 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 GOLGA6L4A6NEF3 574 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 TNFRSF10CO14798 259 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 LRIG2O94898 1065 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 CPNE6O95741 557 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 HOXC4P09017 264 aaPredicted RBP8.25□□□□□ -1.09
USP39-216ENST00000490193 MMP12P39900 470 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 CASRP41180 1078 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 ARSDP51689 593 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 MAPK10P53779 464 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 B4GALNT1Q00973 533 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 KCNAB2Q13303 367 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 SERINC3Q13530 473 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 GRM3Q14832 879 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 UGP2Q16851 508 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 EFHC2Q5JST6 749 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 DPY19L2P1Q6NXN4 242 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 RD3Q7Z3Z2 195 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 IRF2BP1Q8IU81 584 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 Q8N9G6 341 aaPredicted RBP8.25□□□□□ -1.09
USP39-216ENST00000490193 TTC13Q8NBP0 860 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 FAM46DQ8NEK8 389 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 OR56A4Q8NGH8 313 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 GPBAR1Q8TDU6 330 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 OR1E3Q8WZA6 343 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 NKD1Q969G9 470 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 TBC1D31Q96DN5 1066 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 CATSPER2Q96P56 530 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 SEMA6CQ9H3T2 930 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 NOL6Q9H6R4 1146 aaKnown RBP8.25□□□□□ -1.09
USP39-216ENST00000490193 FGF22Q9HCT0 170 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 AKAP7Q9P0M2 348 aaPredicted RBP8.25□□□□□ -1.09
USP39-216ENST00000490193 LRIT1Q9P2V4 623 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 LHX3Q9UBR4 397 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 DNAI1Q9UI46 699 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 DNAJC12Q9UKB3 198 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 COQ6Q9Y2Z9 468 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 OR1A2Q9Y585 309 aa8.25□□□□□ -1.09
USP39-216ENST00000490193 SPENQ96T58 3664 aaKnown RBP8.24□□□□□ -1.09
USP39-216ENST00000490193 TMEM202A6NGA9 273 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 FAM72CH0Y354 149 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 GOLGA8SH3BPF8 625 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 BUB1O43683 1085 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 PNMA6AP0CW24 399 aaPredicted RBP8.24□□□□□ -1.09
USP39-216ENST00000490193 CCL4P13236 92 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 CYP11B1P15538 503 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 XPAP23025 273 aaPredicted RBP8.24□□□□□ -1.09
USP39-216ENST00000490193 KELP23276 732 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 TRIM23P36406 574 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 PTPN9P43378 593 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 ATP1A2P50993 1020 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 POLE2P56282 527 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 YBEYP58557 167 aaPredicted RBP8.24□□□□□ -1.09
USP39-216ENST00000490193 RHOAP61586 193 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 NOMO3P69849 1222 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 SQSTM1Q13501 440 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 TRA2AQ13595 282 aaKnown RBP eCLIP8.24□□□□□ -1.09
USP39-216ENST00000490193 ARHGEF7Q14155 803 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 TCEA2Q15560 299 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 MAP9Q49MG5 647 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 PHF19Q5T6S3 580 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 FAM72AQ5TYM5 149 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 SPECC1LQ69YQ0 1117 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 FAM72DQ6L9T8 149 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 RWDD4Q6NW29 188 aaKnown RBP8.24□□□□□ -1.09
USP39-216ENST00000490193 BRAT1Q6PJG6 821 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 LEKR1Q6ZMV7 388 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 STRADAQ7RTN6 431 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 TAF8Q7Z7C8 310 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 PIM3Q86V86 326 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 FAM72BQ86X60 149 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 DNAAF5Q86Y56 855 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 SFTPA2Q8IWL1 248 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 PLA2G15Q8NCC3 412 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 MSANTD4Q8NCY6 345 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 KIAA1524Q8TCG1 905 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 CENPIQ92674 756 aaPredicted RBP8.24□□□□□ -1.09
USP39-216ENST00000490193 NTAN1Q96AB6 310 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 FUBP1Q96AE4 644 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms