RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 ZNF234Q14588 700 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 UGP2Q16851 508 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 HNRNPA1L2Q32P51 320 aaKnown RBP10.06□□□□□ -0.8
USP11-211ENST00000489111 NAIF1Q69YI7 327 aaPredicted RBP10.06□□□□□ -0.8
USP11-211ENST00000489111 ZNF470Q6ECI4 717 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 GPR153Q6NV75 609 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 BRAT1Q6PJG6 821 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 PACS1Q6VY07 963 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 SRRM1Q8IYB3 904 aaKnown RBP10.06□□□□□ -0.8
USP11-211ENST00000489111 DEFB123Q8N688 67 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 CHST14Q8NCH0 376 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 OR6P1Q8NGX9 317 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 CALML6Q8TD86 181 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 STYXQ8WUJ0 223 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 MTBPQ96DY7 904 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 CHFRQ96EP1 664 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 LRIG1Q96JA1 1093 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 DNAJC1Q96KC8 554 aaKnown RBP10.06□□□□□ -0.8
USP11-211ENST00000489111 P2RY13Q9BPV8 354 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 SELENOSQ9BQE4 189 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 GPR63Q9BZJ6 419 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 SUV39H2Q9H5I1 410 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 IARS2Q9NSE4 1012 aaKnown RBP10.06□□□□□ -0.8
USP11-211ENST00000489111 POLR3BQ9NW08 1133 aaPredicted RBP10.06□□□□□ -0.8
USP11-211ENST00000489111 EURLQ9NYK6 297 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 SLC17A6Q9P2U8 582 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 IL36AQ9UHA7 158 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 RIMKLBQ9ULI2 386 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 FAM50BQ9Y247 325 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 PKP3Q9Y446 797 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 ZNF711Q9Y462 761 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 C2orf16Q68DN1 1984 aa10.06□□□□□ -0.8
USP11-211ENST00000489111 PRRC2BQ5JSZ5 2229 aaKnown RBP10.05□□□□□ -0.8
USP11-211ENST00000489111 A0A0J9YYE9 177 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 C1orf232A0A0U1RR37 186 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 TRIM49D1C9J1S8 452 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 GOLGA8TH3BQL2 631 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 STX7O15400 261 aaKnown RBP10.05□□□□□ -0.8
USP11-211ENST00000489111 SLC7A4O43246 635 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 BUD23O43709 281 aaKnown RBP10.05□□□□□ -0.8
USP11-211ENST00000489111 UGT1A9O60656 530 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 FAM155BO75949 473 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 TRBC1P01850 177 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 PRNPP04156 253 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 SNRPAP09012 282 aaKnown RBP10.05□□□□□ -0.8
USP11-211ENST00000489111 LPOP22079 712 aaPredicted RBP10.05□□□□□ -0.8
USP11-211ENST00000489111 SLC8A1P32418 973 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 ARCN1P48444 511 aaKnown RBP10.05□□□□□ -0.8
USP11-211ENST00000489111 CSE1LP55060 971 aaKnown RBP10.05□□□□□ -0.8
USP11-211ENST00000489111 POLR2LP62875 67 aaKnown RBP10.05□□□□□ -0.8
USP11-211ENST00000489111 PPP2R2AP63151 447 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 TMPRSS15P98073 1019 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 MSLNQ13421 630 aaPredicted RBP10.05□□□□□ -0.8
USP11-211ENST00000489111 BMPR2Q13873 1038 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 ELAVL3Q14576 367 aaKnown RBP10.05□□□□□ -0.8
USP11-211ENST00000489111 TEDDM1Q5T9Z0 273 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 GRTP1Q5TC63 336 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 NEPROQ6NW34 567 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 AFTPHQ6ULP2 937 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 STRA8Q7Z7C7 330 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 DSG4Q86SJ6 1040 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 TRABD2AQ86V40 505 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 CYP4X1Q8N118 509 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 ZNF366Q8N895 744 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 OR13J1Q8NGT2 312 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 PIH1D2Q8WWB5 315 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 OR8D1Q8WZ84 308 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 DNASE1L2Q92874 299 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 PTPRN2Q92932 1015 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 HDAC10Q969S8 669 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 KLHL32Q96NJ5 620 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 SMC6Q96SB8 1091 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 C8orf33Q9H7E9 229 aaPredicted RBP10.05□□□□□ -0.8
USP11-211ENST00000489111 CNOT10Q9H9A5 744 aaKnown RBP10.05□□□□□ -0.8
USP11-211ENST00000489111 UGT1A7Q9HAW7 530 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 UGT1A10Q9HAW8 530 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 UGT1A8Q9HAW9 530 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 KCNK12Q9HB15 430 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 MAGEE1Q9HCI5 957 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 LIMD1Q9UGP4 676 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 PHTF1Q9UMS5 762 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 KCTD3Q9Y597 815 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 ACTL7BQ9Y614 415 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 PIAS3Q9Y6X2 628 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 TRIOBPQ9H2D6 2365 aa10.05□□□□□ -0.8
USP11-211ENST00000489111 SPECC1L-ADORA2AF8WAN1 911 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 KPNA3O00505 521 aaPredicted RBP10.04□□□□□ -0.8
USP11-211ENST00000489111 CCL22O00626 93 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 NPC1O15118 1278 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 LEFTY1O75610 366 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 EPHX1P07099 455 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 ALPIP09923 528 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 HLA-EP13747 358 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 BRAFP15056 766 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 ARNTP27540 789 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 CTHP32929 405 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 SPRP35270 261 aaPredicted RBP10.04□□□□□ -0.8
USP11-211ENST00000489111 HNF1BP35680 557 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 HADHAP40939 763 aa10.04□□□□□ -0.8
USP11-211ENST00000489111 TNFRSF4P43489 277 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms