RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 ARSBP15848 533 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 DCTDP32321 178 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 SHMT1P34896 483 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 PIP4K2AP48426 406 aaPredicted RBP3.36□□□□□ -1.87
CD46-215ENST00000488596 EIF5P55010 431 aaKnown RBP3.36□□□□□ -1.87
CD46-215ENST00000488596 HDAC4P56524 1084 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 OLR1P78380 273 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 CEBPZQ03701 1054 aaKnown RBP3.36□□□□□ -1.87
CD46-215ENST00000488596 FAM27E3Q08E93 113 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 FGFBP1Q14512 234 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 KRT81Q14533 505 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 ALG11Q2TAA5 492 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 ZNF284Q2VY69 593 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 SGO1Q5FBB7 561 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 NCAPH2Q6IBW4 605 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 TTI2Q6NXR4 508 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 TSSK4Q6SA08 328 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 CYP20A1Q6UW02 462 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 HAPLN4Q86UW8 402 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 PALB2Q86YC2 1186 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 DENND6AQ8IWF6 608 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 MB21D2Q8IYB1 491 aaPredicted RBP3.36□□□□□ -1.87
CD46-215ENST00000488596 PDILTQ8N807 584 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 BICD2Q8TD16 824 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 PSPC1Q8WXF1 523 aaKnown RBP3.36□□□□□ -1.87
CD46-215ENST00000488596 GTF3C6Q969F1 213 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 TMEM204Q9BSN7 226 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 FTOQ9C0B1 505 aaKnown RBP eCLIP3.36□□□□□ -1.87
CD46-215ENST00000488596 PLEKHA4Q9H4M7 779 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 POLR1BQ9H9Y6 1135 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 KIF9Q9HAQ2 790 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 SCPEP1Q9HB40 452 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 MAGEE1Q9HCI5 957 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 SLC6A13Q9NSD5 602 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 SEPT11Q9NVA2 429 aaKnown RBP3.36□□□□□ -1.87
CD46-215ENST00000488596 ANKRD10Q9NXR5 420 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 NCKIPSDQ9NZQ3 722 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 CNOT8Q9UFF9 292 aaKnown RBP3.36□□□□□ -1.87
CD46-215ENST00000488596 HAO1Q9UJM8 370 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 CORO1CQ9ULV4 474 aaPredicted RBP3.36□□□□□ -1.87
CD46-215ENST00000488596 INSL5Q9Y5Q6 135 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 A0A0U1RQF3 1178 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 A0A1B0GVT2 93 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 SERINC4A6NH21 518 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 KDM4EB2RXH2 506 aaPredicted RBP3.35□□□□□ -1.87
CD46-215ENST00000488596 USP17L23D6RBM5 183 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 TNFRSF13BO14836 293 aaPredicted RBP3.35□□□□□ -1.87
CD46-215ENST00000488596 ITM2AO43736 263 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 HNRNPCL1O60812 293 aaKnown RBP3.35□□□□□ -1.87
CD46-215ENST00000488596 ZBED4O75132 1171 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 PTP4A3O75365 173 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 TIPRLO75663 272 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 MT-CYBP00156 380 aaPredicted RBP3.35□□□□□ -1.87
CD46-215ENST00000488596 ETFAP13804 333 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 HOXB2P14652 356 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 IL7RP16871 459 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 ARRB2P32121 409 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 ARL3P36405 182 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 PIGAP37287 484 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 ARL1P40616 181 aaPredicted RBP3.35□□□□□ -1.87
CD46-215ENST00000488596 RASSF2P50749 326 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 MAMLD1Q13495 774 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 EIF4A2Q14240 407 aaKnown RBP3.35□□□□□ -1.87
CD46-215ENST00000488596 CCNG2Q16589 344 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 C2orf68Q2NKX9 166 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 ITPRIPL1Q6GPH6 555 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 LCTLQ6UWM7 567 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 NEK10Q6ZWH5 1172 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 IKBIPQ70UQ0 350 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 MON1BQ7L1V2 547 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 ADSSL1Q8N142 457 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 MIGA1Q8NAN2 632 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 TMEM116Q8NCL8 245 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 ARRDC2Q8TBH0 407 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 USP6NLQ92738 828 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 SNAPC3Q92966 411 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 SMARCE1Q969G3 411 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 ERGIC1Q969X5 290 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 LMLNQ96KR4 655 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 SDF4Q9BRK5 362 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 PLAC1Q9HBJ0 212 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 BPIFA1Q9NP55 256 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 DDX4Q9NQI0 724 aaKnown RBP3.35□□□□□ -1.87
CD46-215ENST00000488596 EIF2B3Q9NR50 452 aaKnown RBP3.35□□□□□ -1.87
CD46-215ENST00000488596 SMYD2Q9NRG4 433 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 CYSLTR2Q9NS75 346 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 DIAPH3Q9NSV4 1193 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 TBC1D22BQ9NU19 505 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 TXLNGQ9NUQ3 528 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 PLK2Q9NYY3 685 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 LIMA1Q9UHB6 759 aaKnown RBP3.35□□□□□ -1.87
CD46-215ENST00000488596 NFE2L3Q9Y4A8 694 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 RAI2Q9Y5P3 530 aa3.35□□□□□ -1.87
CD46-215ENST00000488596 FAM237AA0A1B0GTK4 181 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 FSD2A1L4K1 749 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 INAFM1C9JVW0 142 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 MS4A18H0YCH9 400 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 J3KR12 359 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 PAGE4O60829 102 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 GFPT2O94808 682 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms