RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 DCDC2BA2VCK2 349 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 H0Y8X5 98 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 KCNK3O14649 394 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 YKT6O15498 198 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 ZNF189O75820 626 aaPredicted RBP15.13■□□□□ 0.01
CXCL12-207ENST00000488591 ELFN1P0C7U0 828 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 C6P13671 934 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 VIPR1P32241 457 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 RABIFP47224 123 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 ARRB1P49407 418 aaPredicted RBP15.13■□□□□ 0.01
CXCL12-207ENST00000488591 CLDN2P57739 230 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 RPL26P61254 145 aaKnown RBP15.13■□□□□ 0.01
CXCL12-207ENST00000488591 SEMG2Q02383 582 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 NIPAL4Q0D2K0 466 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 NOMO1Q15155 1222 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 RPS6KA1Q15418 735 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 SEL1L2Q5TEA6 688 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 GCNT7Q6ZNI0 430 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 Q6ZSR6 202 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 USP45Q70EL2 814 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 PTAR1Q7Z6K3 402 aaPredicted RBP15.13■□□□□ 0.01
CXCL12-207ENST00000488591 ABI3BPQ7Z7G0 1075 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 CDKL3Q8IVW4 592 aaPredicted RBP15.13■□□□□ 0.01
CXCL12-207ENST00000488591 TTC13Q8NBP0 860 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 ACTL9Q8TC94 416 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 HTR3CQ8WXA8 447 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 SCRN2Q96FV2 425 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 QKIQ96PU8 341 aaKnown RBP eCLIP15.13■□□□□ 0.01
CXCL12-207ENST00000488591 ELF4Q99607 663 aaPredicted RBP15.13■□□□□ 0.01
CXCL12-207ENST00000488591 KLF6Q99612 283 aaPredicted RBP15.13■□□□□ 0.01
CXCL12-207ENST00000488591 TDRD1Q9BXT4 1180 aaKnown RBP15.13■□□□□ 0.01
CXCL12-207ENST00000488591 ADGRE3Q9BY15 652 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 CEP41Q9BYV8 373 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 SLC25A51Q9H1U9 297 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 SLC32A1Q9H598 525 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 IL21RQ9HBE5 538 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 PCDH9Q9HC56 1237 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 B4GALT6Q9UBX8 382 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 RPL26L1Q9UNX3 145 aaKnown RBP15.13■□□□□ 0.01
CXCL12-207ENST00000488591 CHKBQ9Y259 395 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 PCDHGB2Q9Y5G2 931 aa15.13■□□□□ 0.01
CXCL12-207ENST00000488591 A8MX80 341 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 TOR1BO14657 336 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 TM4SF5O14894 197 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 RAD51BO15315 384 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 ZSCAN12O43309 604 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 FZD6O60353 706 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 STK10O94804 968 aaKnown RBP15.12■□□□□ 0.01
CXCL12-207ENST00000488591 PDHA1P08559 390 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 PTPN3P26045 913 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 CCT8P50990 548 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 EIF3EP60228 445 aaKnown RBP15.12■□□□□ 0.01
CXCL12-207ENST00000488591 OTUD4Q01804 1114 aaKnown RBP15.12■□□□□ 0.01
CXCL12-207ENST00000488591 ARHGEF7Q14155 803 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 GSE1Q14687 1217 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 LRRC14Q15048 493 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 MEI1Q5TIA1 1274 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 AADACL2Q6P093 401 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 DARS2Q6PI48 645 aaKnown RBP15.12■□□□□ 0.01
CXCL12-207ENST00000488591 LIPIQ6XZB0 460 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 KYAT3Q6YP21 454 aaKnown RBP15.12■□□□□ 0.01
CXCL12-207ENST00000488591 PID1Q7Z2X4 250 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 TRIM58Q8NG06 486 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 PIH1D2Q8WWB5 315 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 CENPTQ96BT3 561 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 IMP4Q96G21 291 aaKnown RBP15.12■□□□□ 0.01
CXCL12-207ENST00000488591 BMFQ96LC9 184 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 TEKT5Q96M29 485 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 GLOD4Q9HC38 313 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 KCTD5Q9NXV2 234 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 KLHL8Q9P2G9 620 aaPredicted RBP15.12■□□□□ 0.01
CXCL12-207ENST00000488591 TRHDEQ9UKU6 1024 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 DNPEPQ9ULA0 475 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 FNDC3AQ9Y2H6 1198 aaKnown RBP15.12■□□□□ 0.01
CXCL12-207ENST00000488591 COQ6Q9Y2Z9 468 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 PPIL1Q9Y3C6 166 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 LAMA1P25391 3075 aa15.12■□□□□ 0.01
CXCL12-207ENST00000488591 DMXL1Q9Y485 3027 aa15.11■□□□□ 0.01
CXCL12-207ENST00000488591 A0A1B0GTQ1 180 aa15.11■□□□□ 0.01
CXCL12-207ENST00000488591 POM121BA6NF01 834 aa15.11■□□□□ 0.01
CXCL12-207ENST00000488591 CTPS1P17812 591 aa15.11■□□□□ 0.01
CXCL12-207ENST00000488591 CSRP1P21291 193 aaKnown RBP15.11■□□□□ 0.01
CXCL12-207ENST00000488591 TNNT3P45378 269 aaPredicted RBP15.11■□□□□ 0.01
CXCL12-207ENST00000488591 SKOR1P84550 965 aa15.11■□□□□ 0.01
CXCL12-207ENST00000488591 WASHC5Q12768 1159 aa15.11■□□□□ 0.01
CXCL12-207ENST00000488591 RALGDSQ12967 914 aa15.11■□□□□ 0.01
CXCL12-207ENST00000488591 PTK2BQ14289 1009 aa15.11■□□□□ 0.01
CXCL12-207ENST00000488591 ACOX1Q15067 660 aa15.11■□□□□ 0.01
CXCL12-207ENST00000488591 AGERQ15109 404 aa15.11■□□□□ 0.01
CXCL12-207ENST00000488591 INAVAQ3KP66 663 aa15.11■□□□□ 0.01
CXCL12-207ENST00000488591 CCDC70Q6NSX1 233 aa15.11■□□□□ 0.01
CXCL12-207ENST00000488591 SPATS2Q86XZ4 545 aaKnown RBP15.11■□□□□ 0.01
CXCL12-207ENST00000488591 TP53I13Q8NBR0 393 aaPredicted RBP15.11■□□□□ 0.01
CXCL12-207ENST00000488591 OR13H1Q8NG92 308 aa15.11■□□□□ 0.01
CXCL12-207ENST00000488591 RBM15Q96T37 977 aaKnown RBP eCLIP15.11■□□□□ 0.01
CXCL12-207ENST00000488591 HERPUD2Q9BSE4 406 aa15.11■□□□□ 0.01
CXCL12-207ENST00000488591 A0A0J9YYE9 177 aa15.1■□□□□ 0.01
CXCL12-207ENST00000488591 PSMD11O00231 422 aa15.1■□□□□ 0.01
CXCL12-207ENST00000488591 PCDHGA12O60330 932 aa15.1■□□□□ 0.01
CXCL12-207ENST00000488591 RECQL5O94762 991 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms