RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 RECQLP46063 649 aaPredicted RBP7.08□□□□□ -1.28
SF3A3-206ENST00000487062 GRIA4P48058 902 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 ARCN1P48444 511 aaKnown RBP7.08□□□□□ -1.28
SF3A3-206ENST00000487062 CD151P48509 253 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 DGKGP49619 791 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 NEK3P51956 506 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 SEC24CP53992 1094 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 SLC12A2P55011 1212 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 WDR4P57081 412 aaKnown RBP7.08□□□□□ -1.28
SF3A3-206ENST00000487062 ECT2LQ008S8 904 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 ACVR1Q04771 509 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 TRAF2Q12933 501 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 MSLNQ13421 630 aaPredicted RBP7.08□□□□□ -1.28
SF3A3-206ENST00000487062 IHHQ14623 411 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 PDGFRLQ15198 375 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 DHCR24Q15392 516 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 SMAD1Q15797 465 aaKnown RBP7.08□□□□□ -1.28
SF3A3-206ENST00000487062 TAF1BQ53T94 588 aaPredicted RBP7.08□□□□□ -1.28
SF3A3-206ENST00000487062 ATXN7L2Q5T6C5 722 aaPredicted RBP7.08□□□□□ -1.28
SF3A3-206ENST00000487062 ZNF470Q6ECI4 717 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 CES5AQ6NT32 575 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 MRNIPQ6NTE8 343 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 ANKRD54Q6NXT1 300 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 C22orf39Q6P5X5 142 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 KYAT3Q6YP21 454 aaKnown RBP7.08□□□□□ -1.28
SF3A3-206ENST00000487062 SH2D5Q6ZV89 423 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 GET4Q7L5D6 327 aaPredicted RBP7.08□□□□□ -1.28
SF3A3-206ENST00000487062 GLT6D1Q7Z4J2 308 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 KIAA0907Q7Z7F0 614 aaPredicted RBP7.08□□□□□ -1.28
SF3A3-206ENST00000487062 GALNT7Q86SF2 657 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 SDCCAG8Q86SQ7 713 aaPredicted RBP7.08□□□□□ -1.28
SF3A3-206ENST00000487062 RNF135Q8IUD6 432 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 NPAS3Q8IXF0 933 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 DEPDC4Q8N2C3 294 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 DCLK2Q8N568 766 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 C2CD4AQ8NCU7 369 aaPredicted RBP7.08□□□□□ -1.28
SF3A3-206ENST00000487062 LPCAT1Q8NF37 534 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 OR2AP1Q8NGE2 309 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 OR6P1Q8NGX9 317 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 C1orf216Q8TAB5 229 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 RIN3Q8TB24 985 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 LRRC8CQ8TDW0 803 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 ZNF473Q8WTR7 871 aaKnown RBP7.08□□□□□ -1.28
SF3A3-206ENST00000487062 PDCD6IPQ8WUM4 868 aaKnown RBP7.08□□□□□ -1.28
SF3A3-206ENST00000487062 SCG3Q8WXD2 468 aaKnown RBP7.08□□□□□ -1.28
SF3A3-206ENST00000487062 ISL2Q96A47 359 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 MYO19Q96H55 970 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 VPS39Q96JC1 886 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 LMLNQ96KR4 655 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 ASB16Q96NS5 453 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 TUBGCP5Q96RT8 1024 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 CCT8L2Q96SF2 557 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 AGAP2Q99490 1192 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 GPR22Q99680 433 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 SLC13A1Q9BZW2 595 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 TM6SF2Q9BZW4 377 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 VPS11Q9H270 941 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 MFSD1Q9H3U5 465 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 TRPV4Q9HBA0 871 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 MLXIPLQ9NP71 852 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 PCMTD2Q9NV79 361 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 NLE1Q9NVX2 485 aaPredicted RBP7.08□□□□□ -1.28
SF3A3-206ENST00000487062 IL1RAPL1Q9NZN1 696 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 SLC17A6Q9P2U8 582 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 SLC2A6Q9UGQ3 507 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 EVLQ9UI08 416 aaPredicted RBP7.08□□□□□ -1.28
SF3A3-206ENST00000487062 TLK1Q9UKI8 766 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 FBXO5Q9UKT4 447 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 INTS6Q9UL03 887 aaKnown RBP7.08□□□□□ -1.28
SF3A3-206ENST00000487062 CLEC4EQ9ULY5 219 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 HS3ST2Q9Y278 367 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 ANKRD6Q9Y2G4 727 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 PCDHGC4Q9Y5F7 938 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 PSAT1Q9Y617 370 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 MYO7AQ13402 2215 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 HMX2A2RU54 273 aa7.07□□□□□ -1.28
SF3A3-206ENST00000487062 EPOPA6NHQ4 379 aa7.07□□□□□ -1.28
SF3A3-206ENST00000487062 HEPACAM2A8MVW5 462 aa7.07□□□□□ -1.28
SF3A3-206ENST00000487062 TCP11X1B4DZS4 312 aa7.07□□□□□ -1.28
SF3A3-206ENST00000487062 GOLGA8TH3BQL2 631 aa7.07□□□□□ -1.28
SF3A3-206ENST00000487062 K7ERQ8 282 aa7.07□□□□□ -1.28
SF3A3-206ENST00000487062 RFXAPO00287 272 aa7.07□□□□□ -1.28
SF3A3-206ENST00000487062 STX7O15400 261 aaKnown RBP7.07□□□□□ -1.28
SF3A3-206ENST00000487062 HOXC11O43248 304 aaPredicted RBP7.07□□□□□ -1.28
SF3A3-206ENST00000487062 SMAD6O43541 496 aaKnown RBP7.07□□□□□ -1.28
SF3A3-206ENST00000487062 PGLSO95336 258 aa7.07□□□□□ -1.28
SF3A3-206ENST00000487062 POP4O95707 220 aaKnown RBP7.07□□□□□ -1.28
SF3A3-206ENST00000487062 F12P00748 615 aaPredicted RBP7.07□□□□□ -1.28
SF3A3-206ENST00000487062 PRLP01236 227 aa7.07□□□□□ -1.28
SF3A3-206ENST00000487062 AHSGP02765 367 aa7.07□□□□□ -1.28
SF3A3-206ENST00000487062 ALDOAP04075 364 aaKnown RBP7.07□□□□□ -1.28
SF3A3-206ENST00000487062 CYP17A1P05093 508 aa7.07□□□□□ -1.28
SF3A3-206ENST00000487062 ATP5BP06576 529 aaKnown RBP7.07□□□□□ -1.28
SF3A3-206ENST00000487062 SRPRAP08240 638 aaKnown RBP7.07□□□□□ -1.28
SF3A3-206ENST00000487062 PDHA1P08559 390 aa7.07□□□□□ -1.28
SF3A3-206ENST00000487062 OGNP20774 298 aaKnown RBP7.07□□□□□ -1.28
SF3A3-206ENST00000487062 NFKBIAP25963 317 aa7.07□□□□□ -1.28
SF3A3-206ENST00000487062 MAGEA12P43365 314 aa7.07□□□□□ -1.28
SF3A3-206ENST00000487062 LEPRP48357 1165 aaKnown RBP7.07□□□□□ -1.28
SF3A3-206ENST00000487062 CLCN5P51795 746 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms