RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 TGIF1Q15583 401 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 PARP15Q460N3 678 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 ANO6Q4KMQ2 910 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 FAXCQ5TGI0 409 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 RBM44Q6ZP01 1051 aaKnown RBP10.67□□□□□ -0.7
HMGN1-215ENST00000485550 RD3Q7Z3Z2 195 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 ZSCAN30Q86W11 494 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 CAMK1DQ8IU85 385 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 PHACTR4Q8IZ21 702 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 UMODL1-AS1Q8N2C9 162 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 TP53I13Q8NBR0 393 aaPredicted RBP10.67□□□□□ -0.7
HMGN1-215ENST00000485550 DENND6BQ8NEG7 585 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 WDR36Q8NI36 951 aaKnown RBP10.67□□□□□ -0.7
HMGN1-215ENST00000485550 CASKIN2Q8WXE0 1202 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 TRIM7Q9C029 511 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 SUV39H2Q9H5I1 410 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 EVA1BQ9NVM1 165 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 SPASTQ9UBP0 616 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 APOBEC3BQ9UH17 382 aaKnown RBP10.67□□□□□ -0.7
HMGN1-215ENST00000485550 AP4E1Q9UPM8 1137 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 PCDHGA8Q9Y5G5 932 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 MYO9AB2RTY4 2548 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 TEP1Q99973 2627 aaKnown RBP10.66□□□□□ -0.7
HMGN1-215ENST00000485550 EEF2KO00418 725 aaKnown RBP10.66□□□□□ -0.7
HMGN1-215ENST00000485550 MUSKO15146 869 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 BUB1BO60566 1050 aaPredicted RBP10.66□□□□□ -0.7
HMGN1-215ENST00000485550 DESP17661 470 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 RGRP47804 291 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 PAPOLAP51003 745 aaKnown RBP10.66□□□□□ -0.7
HMGN1-215ENST00000485550 AIF1P55008 147 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 UBAP2LQ14157 1087 aaKnown RBP10.66□□□□□ -0.7
HMGN1-215ENST00000485550 PTK2BQ14289 1009 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 IRF4Q15306 451 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 ASIC2Q16515 512 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 TMEM52BQ4KMG9 183 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 PERM1Q5SV97 790 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 CFAP58Q5T655 872 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 ZCCHC8Q6NZY4 707 aaKnown RBP10.66□□□□□ -0.7
HMGN1-215ENST00000485550 ARHGAP36Q6ZRI8 547 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 NYAP1Q6ZVC0 841 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 ZNF571Q7Z3V5 609 aaPredicted RBP10.66□□□□□ -0.7
HMGN1-215ENST00000485550 CLEC14AQ86T13 490 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 ARFGAP1Q8N6T3 406 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 BTN2A2Q8WVV5 523 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 TSACCQ96A04 125 aaPredicted RBP10.66□□□□□ -0.7
HMGN1-215ENST00000485550 SGF29Q96ES7 293 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 PEBP4Q96S96 227 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 KCTD15Q96SI1 283 aaPredicted RBP10.66□□□□□ -0.7
HMGN1-215ENST00000485550 SYT11Q9BT88 431 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 SNRNP25Q9BV90 132 aaKnown RBP10.66□□□□□ -0.7
HMGN1-215ENST00000485550 CLPBQ9H078 707 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 HAUS4Q9H6D7 363 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 LRRC19Q9H756 370 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 SYNDIG1Q9H7V2 258 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 USP29Q9HBJ7 922 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 PCDH12Q9NPG4 1184 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 PARVAQ9NVD7 372 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 TMEM63CQ9P1W3 806 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 DKK3Q9UBP4 350 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 ATXN7L1Q9ULK2 861 aaPredicted RBP10.66□□□□□ -0.7
HMGN1-215ENST00000485550 MFHAS1Q9Y4C4 1052 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 CSNK1G3Q9Y6M4 447 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 RELNP78509 3460 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 SDK2Q58EX2 2172 aa10.66□□□□□ -0.7
HMGN1-215ENST00000485550 UTP20O75691 2785 aaKnown RBP10.65□□□□□ -0.7
HMGN1-215ENST00000485550 ARHGEF17Q96PE2 2063 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-215ENST00000485550 DOCK4Q8N1I0 1966 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 EME2A4GXA9 379 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-215ENST00000485550 TMEM191CA6NGB0 347 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 DFFAO00273 331 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 YY2O15391 372 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 FGF10O15520 208 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-215ENST00000485550 PRAMEF11O60813 436 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 PALMO75781 387 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 FTLP02792 175 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-215ENST00000485550 ANXA6P08133 673 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 CELA2BP08218 269 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-215ENST00000485550 SKILP12757 684 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 GP1BBP13224 206 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 TSHRP16473 764 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 ERCC2P18074 760 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 MIPP30301 263 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 SLC5A2P31639 672 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 LIG3P49916 1009 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 NDST2P52849 883 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 YPEL5P62699 121 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 PPARDQ03181 441 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 ELP6Q0PNE2 266 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 LRRC14Q15048 493 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 NR0B2Q15466 257 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 UGP2Q16851 508 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 WSCD2Q2TBF2 565 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 PPP6R3Q5H9R7 873 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-215ENST00000485550 ERMARDQ5T6L9 678 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 E4F1Q66K89 784 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-215ENST00000485550 PLEKHA7Q6IQ23 1121 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 ENPP7Q6UWV6 458 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 ZSWIM9Q86XI8 627 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 JAMLQ86YT9 394 aa10.65□□□□□ -0.7
HMGN1-215ENST00000485550 HID1Q8IV36 788 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms