RNA–Protein interactions for RNA: ENST00000484555.1

PABPC4-215, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-215	ENST00000484555	DAAM1	Q9Y4D1	1078 aa		12.51	□□□□□ -0.41
PABPC4-215	ENST00000484555	SDK2	Q58EX2	2172 aa		12.51	□□□□□ -0.41
PABPC4-215	ENST00000484555	TEX15	Q9BXT5	2789 aa		12.51	□□□□□ -0.41
PABPC4-215	ENST00000484555	AGRP	O00253	132 aa		12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	CACNB4	O00305	520 aa	Predicted RBP	12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	CAPN5	O15484	640 aa	Predicted RBP	12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	INSIG1	O15503	277 aa		12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	ZW10	O43264	779 aa		12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	LSM8	O95777	96 aa	Known RBP	12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	CYP11B1	P15538	503 aa		12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	KEL	P23276	732 aa		12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	UGT1A3	P35503	534 aa		12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	STAT1	P42224	750 aa		12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	GPR3	P46089	330 aa		12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	YBEY	P58557	167 aa	Predicted RBP	12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	ATP11A	P98196	1134 aa		12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	TSR1	Q2NL82	804 aa	Known RBP	12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	DPY19L2P1	Q6NXN4	242 aa		12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	ERAP2	Q6P179	960 aa		12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	BRAT1	Q6PJG6	821 aa		12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	FAM26E	Q8N5C1	309 aa		12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	PLA2G15	Q8NCC3	412 aa		12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	MSANTD4	Q8NCY6	345 aa		12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	KIAA1524	Q8TCG1	905 aa		12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	JPH3	Q8WXH2	748 aa	Predicted RBP	12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	TBC1D31	Q96DN5	1066 aa		12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	ZNF641	Q96N77	438 aa	Predicted RBP	12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	DDA1	Q9BW61	102 aa		12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	TMEM168	Q9H0V1	697 aa		12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	PDCL3	Q9H2J4	239 aa		12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	DPEP2	Q9H4A9	486 aa		12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	NOL6	Q9H6R4	1146 aa	Known RBP	12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	RDH14	Q9HBH5	336 aa		12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	MRPL40	Q9NQ50	206 aa	Known RBP	12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	LHX3	Q9UBR4	397 aa		12.5	□□□□□ -0.41
PABPC4-215	ENST00000484555	ZFC3H1	O60293	1989 aa	Known RBP	12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	IGHV5-10-1	A0A0J9YXX1	117 aa		12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	ZNF891	A8MT65	544 aa	Predicted RBP	12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555		B4DGG1	531 aa		12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	GOLGA8S	H3BPF8	625 aa		12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	PIGN	O95427	931 aa		12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	PCCB	P05166	539 aa		12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	PLEK	P08567	350 aa	Predicted RBP	12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	PNMA6A	P0CW24	399 aa	Predicted RBP	12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	LIF	P15018	202 aa		12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	CD1C	P29017	333 aa		12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	MMP12	P39900	470 aa		12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	LIMK2	P53671	638 aa		12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	OR1D5	P58170	312 aa		12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	NCAPH	Q15003	741 aa		12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	CYTH1	Q15438	398 aa		12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	RAB6C	Q53S08	254 aa		12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	C2CD6	Q53TS8	623 aa		12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	STRADA	Q7RTN6	431 aa		12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	DNAAF5	Q86Y56	855 aa		12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	IL22RA1	Q8N6P7	574 aa		12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	RTL3	Q8N8U3	475 aa	Known RBP	12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	CCL4L1	Q8NHW4	92 aa		12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	CENPI	Q92674	756 aa	Predicted RBP	12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	NTAN1	Q96AB6	310 aa		12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	SLC45A3	Q96JT2	553 aa		12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	MAGEB5	Q9BZ81	275 aa		12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	KLC2	Q9H0B6	622 aa		12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	RAB6C	Q9H0N0	254 aa		12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	ATP8A1	Q9Y2Q0	1164 aa		12.49	□□□□□ -0.41
PABPC4-215	ENST00000484555	PDE2A	O00408	941 aa	Predicted RBP	12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	BUB1B	O60566	1050 aa	Predicted RBP	12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	RECQL5	O94762	991 aa	Predicted RBP	12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	FGF1	P05230	155 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	CCNB1	P14635	433 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	PTPN9	P43378	593 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	CSNK1D	P48730	415 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	CD97	P48960	835 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	NOMO3	P69849	1222 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	C15orf59	Q2T9L4	293 aa	Predicted RBP	12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	CCDC14	Q49A88	953 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	C4orf17	Q53FE4	359 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	ZSWIM9	Q86XI8	627 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	CACNA2D3	Q8IZS8	1091 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	EMC1	Q8N766	993 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	NETO2	Q8NC67	525 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	AGBL5	Q8NDL9	886 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	RCBTB1	Q8NDN9	531 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	CCDC112	Q8NEF3	446 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	OR4D9	Q8NGE8	314 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	C9orf43	Q8TAL5	461 aa	Predicted RBP	12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	PMEPA1	Q969W9	287 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	CCDC74B	Q96LY2	380 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	TUBGCP5	Q96RT8	1024 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	DPYSL5	Q9BPU6	564 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	NUDT22	Q9BRQ3	303 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	ASPSCR1	Q9BZE9	553 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	SPRY4	Q9C004	299 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	CYP4F12	Q9HCS2	524 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	METTL5	Q9NRN9	209 aa	Known RBP	12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	SPATS2L	Q9NUQ6	558 aa	Known RBP	12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	RWDD2A	Q9UIY3	292 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	B3GALT1	Q9Y5Z6	326 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	ANKRD36	A6QL64	1941 aa		12.48	□□□□□ -0.41
PABPC4-215	ENST00000484555	PRSS38	A1L453	326 aa		12.47	□□□□□ -0.41

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