RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 IRGQQ8WZA9 623 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 NT5C3BQ969T7 300 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 NTAN1Q96AB6 310 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 CCDC120Q96HB5 630 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 TMEM41AQ96HV5 264 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 Q96M66 194 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 UROC1Q96N76 676 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 QKIQ96PU8 341 aaKnown RBP eCLIP7.86□□□□□ -1.152e-7■■■■□ 25
SNX13-208ENST00000482558 PEBP4Q96S96 227 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 FAM118BQ9BPY3 351 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 TUBB6Q9BUF5 446 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 SNRNP25Q9BV90 132 aaKnown RBP7.86□□□□□ -1.15
SNX13-208ENST00000482558 PITPNM3Q9BZ71 974 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 PRDM14Q9GZV8 571 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 NXF3Q9H4D5 531 aaKnown RBP7.86□□□□□ -1.15
SNX13-208ENST00000482558 USP29Q9HBJ7 922 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 LRRC4Q9HBW1 653 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 CD320Q9NPF0 282 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 EIF2B3Q9NR50 452 aaKnown RBP7.86□□□□□ -1.15
SNX13-208ENST00000482558 MRGBPQ9NV56 204 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 SLC13A4Q9UKG4 626 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 TMCC3Q9ULS5 477 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.86□□□□□ -1.15
SNX13-208ENST00000482558 SQORQ9Y6N5 450 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 CAPN7Q9Y6W3 813 aa7.86□□□□□ -1.15
SNX13-208ENST00000482558 CAPN8A6NHC0 703 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 ERI2A8K979 691 aaKnown RBP7.85□□□□□ -1.15
SNX13-208ENST00000482558 PRR33A8MZF0 331 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 NPIPB6E9PJ23 425 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 ARVCFO00192 962 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 CYB561D2O14569 222 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 TNPO2O14787 897 aaKnown RBP7.85□□□□□ -1.15
SNX13-208ENST00000482558 KPNA5O15131 536 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 KCNN4O15554 427 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 OPHN1O60890 802 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 ZNF623O75123 536 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 DCTN3O75935 186 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 KRT38O76015 456 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 KCNH1O95259 989 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 IL1BP01584 269 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 MT-ND3P03897 115 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 ATP5BP06576 529 aaKnown RBP7.85□□□□□ -1.15
SNX13-208ENST00000482558 THP07101 528 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 CD48P09326 243 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 MED14OSP0DP75 135 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 ALADP13716 330 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 ETS1P14921 441 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 PTPN1P18031 435 aaKnown RBP7.85□□□□□ -1.15
SNX13-208ENST00000482558 CA4P22748 312 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 IL4RP24394 825 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 CYP2F1P24903 491 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 CYP2C18P33260 490 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 HTR7P34969 479 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 IFNAR2P48551 515 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 RGS7P49802 495 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 RASSF2P50749 326 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 MECP2P51608 486 aaKnown RBP7.85□□□□□ -1.15
SNX13-208ENST00000482558 MRPS5P82675 430 aaKnown RBP7.85□□□□□ -1.15
SNX13-208ENST00000482558 ZNF33AQ06730 810 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 STARD3Q14849 445 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 CDO1Q16878 200 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 C15orf59Q2T9L4 293 aaPredicted RBP7.85□□□□□ -1.15
SNX13-208ENST00000482558 SLC35F1Q5T1Q4 408 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 NPNTQ6UXI9 565 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 USP45Q70EL2 814 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 MRPL10Q7Z7H8 261 aaKnown RBP7.85□□□□□ -1.15
SNX13-208ENST00000482558 LCA5Q86VQ0 697 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 SLC26A11Q86WA9 606 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 LRRC6Q86X45 466 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 METTL23Q86XA0 190 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 CMIPQ8IY22 773 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 ARHGEF39Q8N4T4 335 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 PQLC3Q8N755 202 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 GLIS1Q8NBF1 620 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 PCDH19Q8TAB3 1148 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 RAB3IL1Q8TBN0 382 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 SLC2A14Q8TDB8 520 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 ADAMTS18Q8TE60 1221 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 TFB1MQ8WVM0 346 aaKnown RBP7.85□□□□□ -1.15
SNX13-208ENST00000482558 SLC44A1Q8WWI5 657 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 PGAP3Q96FM1 320 aaPredicted RBP7.85□□□□□ -1.15
SNX13-208ENST00000482558 PPP1R2P1Q96PQ5 205 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 PPP1R10Q96QC0 940 aaKnown RBP7.85□□□□□ -1.15
SNX13-208ENST00000482558 PAFAH2Q99487 392 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 TREX2Q9BQ50 279 aaPredicted RBP7.85□□□□□ -1.15
SNX13-208ENST00000482558 UPF3AQ9H1J1 476 aaKnown RBP7.85□□□□□ -1.15
SNX13-208ENST00000482558 RABEP2Q9H5N1 569 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 POPDC2Q9HBU9 364 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 RXFP1Q9HBX9 757 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 CNGB3Q9NQW8 809 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 FAM49BQ9NUQ9 324 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 ETNK2Q9NVF9 386 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 DNAJC17Q9NVM6 304 aaKnown RBP7.85□□□□□ -1.15
SNX13-208ENST00000482558 C19orf73Q9NVV2 129 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 OXSMQ9NWU1 459 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 GFOD1Q9NXC2 390 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 NFKBIL1Q9UBC1 381 aaPredicted RBP7.85□□□□□ -1.15
SNX13-208ENST00000482558 TBK1Q9UHD2 729 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 CPA4Q9UI42 421 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 CDH9Q9ULB4 789 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms