RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 MPOP05164 745 aa13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 NFKBIAP25963 317 aa13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 HSPA9P38646 679 aaKnown RBP13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 MMP12P39900 470 aa13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 SRP54P61011 504 aaKnown RBP13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 AP1S1P61966 158 aa13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 SLC10A7Q0GE19 358 aa13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 DPYSQ14117 519 aa13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 DPYSL2Q16555 572 aa13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 TMCO3Q6UWJ1 677 aa13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 RBM44Q6ZP01 1051 aaKnown RBP13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 CPNE8Q86YQ8 564 aa13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 SLC35F3Q8IY50 421 aa13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 ZNF248Q8NDW4 579 aa13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 NSMCE1Q8WV22 266 aa13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 HSPH1Q92598 858 aa13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 SYN2Q92777 582 aaPredicted RBP13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 TSACCQ96A04 125 aaPredicted RBP13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 ECHDC3Q96DC8 303 aa13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 CRELD1Q96HD1 420 aa13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 BTBD6Q96KE9 485 aa13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 WDR92Q96MX6 357 aa13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 PSKH2Q96QS6 385 aa13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 ETNK2Q9NVF9 386 aa13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 GULP1Q9UBP9 304 aa13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 KLQ9UEF7 1012 aa13.52□□□□□ -0.25
CTDSP1-208ENST00000482272 A0A1W2PQJ5 194 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 TTC24A2A3L6 582 aaPredicted RBP13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 CACNB4O00305 520 aaPredicted RBP13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 DXOO77932 396 aaKnown RBP13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 RECQL5O94762 991 aaPredicted RBP13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 PCCBP05166 539 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 ELFN1P0C7U0 828 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 RARAP10276 462 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 AMPD1P23109 780 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 KELP23276 732 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 RBMS1P29558 406 aaKnown RBP13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 UBASH3AP57075 661 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 PCBP4P57723 403 aaKnown RBP13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 ERVPABLB-1P60509 514 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 FANCCQ00597 558 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 CCDC173Q0VFZ6 552 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 ZNF235Q14590 738 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 NFKBIBQ15653 356 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 ALG11Q2TAA5 492 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 PERM1Q5SV97 790 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 CRTC1Q6UUV9 634 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 LIPIQ6XZB0 460 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 POLNQ7Z5Q5 900 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 ARL10Q8N8L6 244 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 OR6C4Q8NGE1 309 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 CPLX3Q8WVH0 158 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 IQCDQ96DY2 449 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 UBL7Q96S82 380 aaPredicted RBP13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 LGMNQ99538 433 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 CCDC3Q9BQI4 270 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 PRORYQ9H606 182 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 KCTD5Q9NXV2 234 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 IP6K2Q9UHH9 426 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 OR1A2Q9Y585 309 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 ANKRD11Q6UB99 2663 aaPredicted RBP13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 ZFYVE26Q68DK2 2539 aa13.51□□□□□ -0.25
CTDSP1-208ENST00000482272 FAM208BQ5VWN6 2430 aa13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 A8MX80 341 aa13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 PDE2AO00408 941 aaPredicted RBP13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 TRAFD1O14545 582 aaPredicted RBP13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 PEX11BO96011 259 aa13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 SERPING1P05155 500 aa13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 CELA2BP08218 269 aaPredicted RBP13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 GM2AP17900 193 aa13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 SERPINB6P35237 376 aa13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 RALGDSQ12967 914 aa13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 SPIDRQ14159 915 aa13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 ACOX1Q15067 660 aa13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 SMTNL2Q2TAL5 461 aa13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 C3orf38Q5JPI3 329 aa13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 BROXQ5VW32 411 aa13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 DPPA4Q7L190 304 aa13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 PLA2G15Q8NCC3 412 aa13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 OR56A4Q8NGH8 313 aa13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 TEKT4Q8WW24 435 aa13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 THAP2Q9H0W7 228 aa13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 THSD1Q9NS62 852 aa13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 NENFQ9UMX5 172 aa13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 GPR34Q9UPC5 381 aa13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 SATB2Q9UPW6 733 aa13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 ENTPD2Q9Y5L3 495 aa13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 RAI2Q9Y5P3 530 aa13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 DGKBQ9Y6T7 804 aa13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 APC2O95996 2303 aa13.5□□□□□ -0.25
CTDSP1-208ENST00000482272 A0A087X0T9 212 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 GOLGA6L19H0YKK7 550 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 TMX2-CTNND1H3BSU7 103 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 MYO1FO00160 1098 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 TNFRSF10CO14798 259 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 GYPCP04921 128 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 HOXC4P09017 264 aaPredicted RBP13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 FAM228BP0C875 321 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 CYP2A6P11509 494 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms