RNA–Protein interactions for RNA: ENST00000482173.5

CHPF2-203, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 4

Gene CHPF2, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-203ENST00000482173 PEBP4Q96S96 227 aa19.46■□□□□ 0.71
CHPF2-203ENST00000482173 KCTD15Q96SI1 283 aaPredicted RBP19.46■□□□□ 0.71
CHPF2-203ENST00000482173 SYT11Q9BT88 431 aa19.46■□□□□ 0.71
CHPF2-203ENST00000482173 SNRNP25Q9BV90 132 aaKnown RBP19.46■□□□□ 0.71
CHPF2-203ENST00000482173 CINPQ9BW66 212 aaPredicted RBP19.46■□□□□ 0.71
CHPF2-203ENST00000482173 SSUH2Q9Y2M2 353 aa19.46■□□□□ 0.71
CHPF2-203ENST00000482173 DFFAO00273 331 aa19.45■□□□□ 0.7
CHPF2-203ENST00000482173 RNF8O76064 485 aa19.45■□□□□ 0.7
CHPF2-203ENST00000482173 RECQL5O94762 991 aaPredicted RBP19.45■□□□□ 0.7
CHPF2-203ENST00000482173 ERCC2P18074 760 aa19.45■□□□□ 0.7
CHPF2-203ENST00000482173 MLLT3P42568 568 aaPredicted RBP19.45■□□□□ 0.7
CHPF2-203ENST00000482173 POLR2LP62875 67 aaKnown RBP19.45■□□□□ 0.7
CHPF2-203ENST00000482173 BCL2L1Q07817 233 aa19.45■□□□□ 0.7
CHPF2-203ENST00000482173 RALGDSQ12967 914 aa19.45■□□□□ 0.7
CHPF2-203ENST00000482173 PPP6R3Q5H9R7 873 aaPredicted RBP19.45■□□□□ 0.7
CHPF2-203ENST00000482173 AFMIDQ63HM1 303 aa19.45■□□□□ 0.7
CHPF2-203ENST00000482173 KCTD16Q68DU8 428 aa19.45■□□□□ 0.7
CHPF2-203ENST00000482173 LIPIQ6XZB0 460 aa19.45■□□□□ 0.7
CHPF2-203ENST00000482173 RFX8Q6ZV50 586 aa19.45■□□□□ 0.7
CHPF2-203ENST00000482173 ZNF605Q86T29 641 aa19.45■□□□□ 0.7
CHPF2-203ENST00000482173 ARHGAP12Q8IWW6 846 aa19.45■□□□□ 0.7
CHPF2-203ENST00000482173 AOPEPQ8N6M6 819 aa19.45■□□□□ 0.7
CHPF2-203ENST00000482173 OR6C4Q8NGE1 309 aa19.45■□□□□ 0.7
CHPF2-203ENST00000482173 ECHDC3Q96DC8 303 aa19.45■□□□□ 0.7
CHPF2-203ENST00000482173 GBP4Q96PP9 640 aa19.45■□□□□ 0.7
CHPF2-203ENST00000482173 GFM1Q96RP9 751 aaKnown RBP19.45■□□□□ 0.7
CHPF2-203ENST00000482173 RBM15Q96T37 977 aaKnown RBP eCLIP19.45■□□□□ 0.75e-8■■■■□ 19.8
CHPF2-203ENST00000482173 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.45■□□□□ 0.7
CHPF2-203ENST00000482173 MYO6Q9UM54 1294 aa19.45■□□□□ 0.7
CHPF2-203ENST00000482173 DGKBQ9Y6T7 804 aa19.45■□□□□ 0.7
CHPF2-203ENST00000482173 ANKRD36A6QL64 1941 aa19.45■□□□□ 0.7
CHPF2-203ENST00000482173 LRP4O75096 1905 aa19.45■□□□□ 0.7
CHPF2-203ENST00000482173 TMEM202A6NGA9 273 aa19.44■□□□□ 0.7
CHPF2-203ENST00000482173 TMEM191CA6NGB0 347 aa19.44■□□□□ 0.7
CHPF2-203ENST00000482173 CACNB4O00305 520 aaPredicted RBP19.44■□□□□ 0.7
CHPF2-203ENST00000482173 TEX33O43247 280 aa19.44■□□□□ 0.7
CHPF2-203ENST00000482173 PRPSAP2O60256 369 aa19.44■□□□□ 0.7
CHPF2-203ENST00000482173 ZIC2O95409 532 aaPredicted RBP19.44■□□□□ 0.7
CHPF2-203ENST00000482173 MIPP30301 263 aa19.44■□□□□ 0.7
CHPF2-203ENST00000482173 SCNN1BP51168 640 aa19.44■□□□□ 0.7
CHPF2-203ENST00000482173 IL10RBQ08334 325 aa19.44■□□□□ 0.7
CHPF2-203ENST00000482173 NSUN2Q08J23 767 aaKnown RBP eCLIP19.44■□□□□ 0.7
CHPF2-203ENST00000482173 RFTN1Q14699 578 aaPredicted RBP19.44■□□□□ 0.7
CHPF2-203ENST00000482173 ARHGAP36Q6ZRI8 547 aa19.44■□□□□ 0.7
CHPF2-203ENST00000482173 B3GNT8Q7Z7M8 397 aa19.44■□□□□ 0.7
CHPF2-203ENST00000482173 CLEC14AQ86T13 490 aa19.44■□□□□ 0.7
CHPF2-203ENST00000482173 OR1E3Q8WZA6 343 aa19.44■□□□□ 0.7
CHPF2-203ENST00000482173 FUBP1Q96AE4 644 aaKnown RBP19.44■□□□□ 0.7
CHPF2-203ENST00000482173 WBP1Q96G27 269 aa19.44■□□□□ 0.7
CHPF2-203ENST00000482173 PDXPQ96GD0 296 aa19.44■□□□□ 0.7
CHPF2-203ENST00000482173 LIN37Q96GY3 246 aaPredicted RBP19.44■□□□□ 0.7
CHPF2-203ENST00000482173 FOXP3Q9BZS1 431 aa19.44■□□□□ 0.7
CHPF2-203ENST00000482173 TRIM7Q9C029 511 aa19.44■□□□□ 0.7
CHPF2-203ENST00000482173 EPB41L5Q9HCM4 733 aa19.44■□□□□ 0.7
CHPF2-203ENST00000482173 A0A1W2PQM1 296 aa19.43■□□□□ 0.7
CHPF2-203ENST00000482173 A8MX80 341 aa19.43■□□□□ 0.7
CHPF2-203ENST00000482173 TMX2-CTNND1H3BSU7 103 aa19.43■□□□□ 0.7
CHPF2-203ENST00000482173 PLD2O14939 933 aa19.43■□□□□ 0.7
CHPF2-203ENST00000482173 RPLP0P05388 317 aaKnown RBP19.43■□□□□ 0.7
CHPF2-203ENST00000482173 ITGA2BP08514 1039 aa19.43■□□□□ 0.7
CHPF2-203ENST00000482173 ELFN1P0C7U0 828 aa19.43■□□□□ 0.7
CHPF2-203ENST00000482173 RAB11FIP2Q7L804 512 aa19.43■□□□□ 0.7
CHPF2-203ENST00000482173 TAF8Q7Z7C8 310 aa19.43■□□□□ 0.7
CHPF2-203ENST00000482173 FBXO39Q8N4B4 442 aa19.43■□□□□ 0.7
CHPF2-203ENST00000482173 NPWQ8N729 165 aa19.43■□□□□ 0.7
CHPF2-203ENST00000482173 FAM46DQ8NEK8 389 aa19.43■□□□□ 0.7
CHPF2-203ENST00000482173 OR56A4Q8NGH8 313 aa19.43■□□□□ 0.7
CHPF2-203ENST00000482173 SNRNP27Q8WVK2 155 aaKnown RBP19.43■□□□□ 0.7
CHPF2-203ENST00000482173 STRADBQ9C0K7 418 aa19.43■□□□□ 0.7
CHPF2-203ENST00000482173 LRRN3Q9H3W5 708 aa19.43■□□□□ 0.7
CHPF2-203ENST00000482173 MRPL40Q9NQ50 206 aaKnown RBP19.43■□□□□ 0.7
CHPF2-203ENST00000482173 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.43■□□□□ 0.7
CHPF2-203ENST00000482173 UNC13CQ8NB66 2214 aa19.42■□□□□ 0.7
CHPF2-203ENST00000482173 CAPN8A6NHC0 703 aa19.42■□□□□ 0.7
CHPF2-203ENST00000482173 LRRC53A6NM62 1247 aa19.42■□□□□ 0.7
CHPF2-203ENST00000482173 D6RAR5 112 aa19.42■□□□□ 0.7
CHPF2-203ENST00000482173 FTLP02792 175 aaPredicted RBP19.42■□□□□ 0.7
CHPF2-203ENST00000482173 KELP23276 732 aa19.42■□□□□ 0.7
CHPF2-203ENST00000482173 HCAR3P49019 387 aa19.42■□□□□ 0.7
CHPF2-203ENST00000482173 INHBCP55103 352 aa19.42■□□□□ 0.7
CHPF2-203ENST00000482173 KIAA1024LP59773 190 aa19.42■□□□□ 0.7
CHPF2-203ENST00000482173 CLN3Q13286 438 aa19.42■□□□□ 0.7
CHPF2-203ENST00000482173 EIF3IQ13347 325 aaKnown RBP19.42■□□□□ 0.7
CHPF2-203ENST00000482173 ASIC2Q16515 512 aa19.42■□□□□ 0.7
CHPF2-203ENST00000482173 OGFOD3Q6PK18 319 aa19.42■□□□□ 0.7
CHPF2-203ENST00000482173 CCDC81Q6ZN84 652 aa19.42■□□□□ 0.7
CHPF2-203ENST00000482173 DPPA4Q7L190 304 aa19.42■□□□□ 0.7
CHPF2-203ENST00000482173 PSTKQ8IV42 348 aaKnown RBP19.42■□□□□ 0.7
CHPF2-203ENST00000482173 Q8N9G6 341 aaPredicted RBP19.42■□□□□ 0.7
CHPF2-203ENST00000482173 GPR156Q8NFN8 814 aa19.42■□□□□ 0.7
CHPF2-203ENST00000482173 NSMCE3Q96MG7 304 aa19.42■□□□□ 0.7
CHPF2-203ENST00000482173 PSKH2Q96QS6 385 aa19.42■□□□□ 0.7
CHPF2-203ENST00000482173 HAUS4Q9H6D7 363 aa19.42■□□□□ 0.7
CHPF2-203ENST00000482173 FGF22Q9HCT0 170 aa19.42■□□□□ 0.7
CHPF2-203ENST00000482173 WDR70Q9NW82 654 aa19.42■□□□□ 0.7
CHPF2-203ENST00000482173 CWC15Q9P013 229 aaKnown RBP19.42■□□□□ 0.7
CHPF2-203ENST00000482173 CNOT8Q9UFF9 292 aaKnown RBP19.42■□□□□ 0.7
CHPF2-203ENST00000482173 SEPT3Q9UH03 358 aa19.42■□□□□ 0.7
CHPF2-203ENST00000482173 K7ENP7 123 aa19.41■□□□□ 0.7
CHPF2-203ENST00000482173 TRAFD1O14545 582 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms