RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 FASTKD3Q14CZ7 662 aaKnown RBP10.21□□□□□ -0.77
USP39-215ENST00000481409 UAP1Q16222 522 aaPredicted RBP10.21□□□□□ -0.77
USP39-215ENST00000481409 QPCTQ16769 361 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 LONRF1Q17RB8 773 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 ANKRD20A4Q4UJ75 823 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 CERCAMQ5T4B2 595 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 TSTD2Q5T7W7 516 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 PDPK2PQ6A1A2 396 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 KIAA0930Q6ICG6 404 aaPredicted RBP10.21□□□□□ -0.77
USP39-215ENST00000481409 ERAP2Q6P179 960 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 UNC5AQ6ZN44 842 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 GLT6D1Q7Z4J2 308 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 MTERF4Q7Z6M4 381 aaKnown RBP10.21□□□□□ -0.77
USP39-215ENST00000481409 TDRPQ86YL5 185 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 ANKMY2Q8IV38 441 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.21□□□□□ -0.77
USP39-215ENST00000481409 SLC25A41Q8N5S1 370 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 GOLGA6L1Q8N7Z2 621 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 LPCAT1Q8NF37 534 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 OR2T3Q8NH03 318 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 PDCD6IPQ8WUM4 868 aaKnown RBP10.21□□□□□ -0.77
USP39-215ENST00000481409 PWWP2AQ96N64 755 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 ASB2Q96Q27 587 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 APOL2Q9BQE5 337 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 HDAC8Q9BY41 377 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 RSPH9Q9H1X1 276 aaPredicted RBP10.21□□□□□ -0.77
USP39-215ENST00000481409 FBRSL1Q9HCM7 1045 aaKnown RBP10.21□□□□□ -0.77
USP39-215ENST00000481409 PRSS16Q9NQE7 514 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 ARHGEF3Q9NR81 526 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 TREX1Q9NSU2 369 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 MOCS1Q9NZB8 636 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 SLC24A2Q9UI40 661 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 RPS6KL1Q9Y6S9 549 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 ZCWPW2A0A1B0GU75 182 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 TTC24A2A3L6 582 aaPredicted RBP10.2□□□□□ -0.78
USP39-215ENST00000481409 GOLGA6L10A6NI86 522 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 UPK3BL1B0FP48 263 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 UPK3BL2E5RIL1 263 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 PFDN6O15212 129 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 SLC7A4O43246 635 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 LDB2O43679 373 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 NARSO43776 548 aaKnown RBP10.2□□□□□ -0.78
USP39-215ENST00000481409 BNIP3LO60238 219 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 GJB3O75712 270 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 PIGNO95427 931 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 ACSL3O95573 720 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 EGFP01133 1207 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 UGT2B4P06133 528 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 PDHA1P08559 390 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 BMP1P13497 986 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 C5AR1P21730 350 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 XPAP23025 273 aaPredicted RBP10.2□□□□□ -0.78
USP39-215ENST00000481409 CNTFP26441 200 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 ATP5DP30049 168 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 TIE1P35590 1138 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 MAGEA9P43362 315 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 CHRNA4P43681 627 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 NUMBP49757 651 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 GPX6P59796 221 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 MGAT5Q09328 741 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 GALNT3Q14435 633 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 POU6F1Q14863 301 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 UGP2Q16851 508 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 KCTD19Q17RG1 926 aaPredicted RBP10.2□□□□□ -0.78
USP39-215ENST00000481409 ARSIQ5FYB1 569 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 LGSNQ5TDP6 509 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 ZNF776Q68DI1 518 aaPredicted RBP10.2□□□□□ -0.78
USP39-215ENST00000481409 KIAA0408Q6ZU52 694 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 KDELC2Q7Z4H8 507 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 GALNT7Q86SF2 657 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 SLC26A11Q86WA9 606 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 RNF135Q8IUD6 432 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 AGGF1Q8N302 714 aaeCLIP10.2□□□□□ -0.78
USP39-215ENST00000481409 CBARPQ8N350 705 aaPredicted RBP10.2□□□□□ -0.78
USP39-215ENST00000481409 IL17RCQ8NAC3 791 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 CHST14Q8NCH0 376 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 PIP4K2CQ8TBX8 421 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 VOPP1Q96AW1 172 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 NSMCE3Q96MG7 304 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 KLHL32Q96NJ5 620 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 FAM129BQ96TA1 746 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 WDR83Q9BRX9 315 aaKnown RBP10.2□□□□□ -0.78
USP39-215ENST00000481409 FAM167BQ9BTA0 163 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 STMN4Q9H169 189 aaPredicted RBP10.2□□□□□ -0.78
USP39-215ENST00000481409 EPB41L4BQ9H329 900 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 ZFYVE1Q9HBF4 777 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 CHRAC1Q9NRG0 131 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 NLE1Q9NVX2 485 aaPredicted RBP10.2□□□□□ -0.78
USP39-215ENST00000481409 VPS18Q9P253 973 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 ZNF180Q9UJW8 692 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 HCN2Q9UL51 889 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 PLAAQ9Y263 795 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 PKP3Q9Y446 797 aa10.2□□□□□ -0.78
USP39-215ENST00000481409 SZT2Q5T011 3432 aa10.19□□□□□ -0.78
USP39-215ENST00000481409 EXOC1LA0A1B0GW35 172 aa10.19□□□□□ -0.78
USP39-215ENST00000481409 TCRBV9S1A1TA0A576 114 aa10.19□□□□□ -0.78
USP39-215ENST00000481409 KANSL1LA0AUZ9 987 aa10.19□□□□□ -0.78
USP39-215ENST00000481409 FAM159BA6NKW6 160 aa10.19□□□□□ -0.78
USP39-215ENST00000481409 C16orf96A6NNT2 1141 aa10.19□□□□□ -0.78
USP39-215ENST00000481409 AP1G1O43747 822 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms