RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 BTBD1Q9H0C5 482 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 ASH1LQ9NR48 2969 aaKnown RBP9.15□□□□□ -0.94
VCP-206ENST00000480327 PPM1HQ9ULR3 514 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 SNX12Q9UMY4 172 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 WASF2Q9Y6W5 498 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 ANKRD36A6QL64 1941 aa9.15□□□□□ -0.95
VCP-206ENST00000480327 A0A087WV48 116 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 A0A1B0GTQ1 180 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 CXorf51AA0A1B0GTR3 108 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 A0A1W2PP55 124 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 A0A1W2PR77 199 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 HACD1B0YJ81 288 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 KCNN4O15554 427 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 TNFSF14O43557 240 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 RNASEH2AO75792 299 aaKnown RBP9.14□□□□□ -0.95
VCP-206ENST00000480327 POP4O95707 220 aaKnown RBP9.14□□□□□ -0.95
VCP-206ENST00000480327 PRNPP04156 253 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 UGT2B4P06133 528 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 PTPN3P26045 913 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 GRK6P43250 576 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 CCT8P50990 548 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 DSC2Q02487 901 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 ZBTB16Q05516 673 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 RAD51Q06609 339 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 XRCC4Q13426 336 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 KCTD19Q17RG1 926 aaPredicted RBP9.14□□□□□ -0.95
VCP-206ENST00000480327 KIAA0895LQ68EN5 471 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.14□□□□□ -0.95
VCP-206ENST00000480327 DSG4Q86SJ6 1040 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 GATAD2AQ86YP4 633 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 CAMK1DQ8IU85 385 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 CDKL3Q8IVW4 592 aaPredicted RBP9.14□□□□□ -0.95
VCP-206ENST00000480327 AADATQ8N5Z0 425 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 TEX26Q8N6G2 289 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 PAF1Q8N7H5 531 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 CNTD1Q8N815 330 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 TTC13Q8NBP0 860 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 HTR3CQ8WXA8 447 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 ZNF592Q92610 1267 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 ARRDC3Q96B67 414 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 NSMCE3Q96MG7 304 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 KLHL32Q96NJ5 620 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 PSKH2Q96QS6 385 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 OMDQ99983 421 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 SEMA3CQ99985 751 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 AP1M1Q9BXS5 423 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 BRD8Q9H0E9 1235 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 PABPC3Q9H361 631 aaKnown RBP9.14□□□□□ -0.95
VCP-206ENST00000480327 FBRSQ9HAH7 460 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 SGK2Q9HBY8 427 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 FBXL12Q9NXK8 326 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 DNPEPQ9ULA0 475 aa9.14□□□□□ -0.95
VCP-206ENST00000480327 A0A1W2PPC4 97 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 C1QTNF3-AMACRE9PGA6 284 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 VILLO15195 856 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 ALOX15BO15296 676 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 TLX3O43711 291 aaPredicted RBP9.13□□□□□ -0.95
VCP-206ENST00000480327 LIASO43766 372 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 ADH1BP00325 375 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 C5AR1P21730 350 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 HSPA9P38646 679 aaKnown RBP9.13□□□□□ -0.95
VCP-206ENST00000480327 ETF1P62495 437 aaKnown RBP9.13□□□□□ -0.95
VCP-206ENST00000480327 IFI35P80217 286 aaPredicted RBP9.13□□□□□ -0.95
VCP-206ENST00000480327 BCL2L1Q07817 233 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 NIPAL4Q0D2K0 466 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 WASHC5Q12768 1159 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 CNTN1Q12860 1018 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 DNAJC3Q13217 504 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 SIX1Q15475 284 aaPredicted RBP9.13□□□□□ -0.95
VCP-206ENST00000480327 TEAD4Q15561 434 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 TTC31Q49AM3 519 aaPredicted RBP9.13□□□□□ -0.95
VCP-206ENST00000480327 TEX44Q53QW1 395 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 CCDC157Q569K6 752 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 LRRC73Q5JTD7 316 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 FAM46CQ5VWP2 391 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 PAPD7Q5XG87 772 aaKnown RBP9.13□□□□□ -0.95
VCP-206ENST00000480327 NCEH1Q6PIU2 408 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 GDPD4Q6W3E5 623 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 USP30Q70CQ3 517 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 PID1Q7Z2X4 250 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 KANSL1Q7Z3B3 1105 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 PLPP6Q8IY26 295 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 ZNF567Q8N184 647 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 GALNT15Q8N3T1 639 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 RASGEF1CQ8N431 466 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 TAB3Q8N5C8 712 aaPredicted RBP9.13□□□□□ -0.95
VCP-206ENST00000480327 TMIEQ8NEW7 156 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 SAP25Q8TEE9 199 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 PDCD6IPQ8WUM4 868 aaKnown RBP9.13□□□□□ -0.95
VCP-206ENST00000480327 VOPP1Q96AW1 172 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 NUDCD1Q96RS6 583 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 IL12RB2Q99665 862 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 MGME1Q9BQP7 344 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 TMEM121Q9BTD3 319 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 POLR1EQ9GZS1 481 aaKnown RBP9.13□□□□□ -0.95
VCP-206ENST00000480327 NEUROG2Q9H2A3 272 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 CAAP1Q9H8G2 361 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 NOD2Q9HC29 1040 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 DYRK4Q9NR20 520 aa9.13□□□□□ -0.95
VCP-206ENST00000480327 UBP1Q9NZI7 540 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms