RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 CACTIN-AS1Q8N1I8 211 aa8.99□□□□□ -0.97
DDX56-211ENST00000479602 AADATQ8N5Z0 425 aa8.99□□□□□ -0.97
DDX56-211ENST00000479602 ATP11CQ8NB49 1132 aa8.99□□□□□ -0.97
DDX56-211ENST00000479602 ARRDC2Q8TBH0 407 aa8.99□□□□□ -0.97
DDX56-211ENST00000479602 CCHCR1Q8TD31 782 aa8.99□□□□□ -0.97
DDX56-211ENST00000479602 SETD7Q8WTS6 366 aaKnown RBP8.99□□□□□ -0.97
DDX56-211ENST00000479602 IMP4Q96G21 291 aaKnown RBP8.99□□□□□ -0.97
DDX56-211ENST00000479602 PPP1R16AQ96I34 528 aa8.99□□□□□ -0.97
DDX56-211ENST00000479602 CELF6Q96J87 481 aaKnown RBP8.99□□□□□ -0.97
DDX56-211ENST00000479602 LYSMD1Q96S90 227 aa8.99□□□□□ -0.97
DDX56-211ENST00000479602 SRPK1Q96SB4 655 aaKnown RBP8.99□□□□□ -0.97
DDX56-211ENST00000479602 HEPHQ9BQS7 1158 aa8.99□□□□□ -0.97
DDX56-211ENST00000479602 SLC25A51Q9H1U9 297 aa8.99□□□□□ -0.97
DDX56-211ENST00000479602 CCDC86Q9H6F5 360 aaKnown RBP8.99□□□□□ -0.97
DDX56-211ENST00000479602 FBXL12Q9NXK8 326 aa8.99□□□□□ -0.97
DDX56-211ENST00000479602 PCYOX1Q9UHG3 505 aa8.99□□□□□ -0.97
DDX56-211ENST00000479602 DNPEPQ9ULA0 475 aa8.99□□□□□ -0.97
DDX56-211ENST00000479602 PCDHGA1Q9Y5H4 931 aa8.99□□□□□ -0.97
DDX56-211ENST00000479602 SHROOM3Q8TF72 1996 aa8.99□□□□□ -0.97
DDX56-211ENST00000479602 ZNF462Q96JM2 2506 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 GOLGA6L10A0A0M3HER8 536 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 SMAPO00193 183 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 DFFAO00273 331 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 ENC1O14682 589 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 NDC80O14777 642 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 MID1O15344 667 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 SMAD6O43541 496 aaKnown RBP8.98□□□□□ -0.97
DDX56-211ENST00000479602 FZD6O60353 706 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 RNASEH1O60930 286 aaKnown RBP8.98□□□□□ -0.97
DDX56-211ENST00000479602 STK10O94804 968 aaKnown RBP8.98□□□□□ -0.97
DDX56-211ENST00000479602 VAV1P15498 845 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 CA4P22748 312 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 NFKBIAP25963 317 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 PTPN3P26045 913 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 CHRNA3P32297 505 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 SLC8A1P32418 973 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 DRD3P35462 400 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 RECQLP46063 649 aaPredicted RBP8.98□□□□□ -0.97
DDX56-211ENST00000479602 STK19P49842 368 aaPredicted RBP8.98□□□□□ -0.97
DDX56-211ENST00000479602 CCNHP51946 323 aaPredicted RBP8.98□□□□□ -0.97
DDX56-211ENST00000479602 EIF3EP60228 445 aaKnown RBP8.98□□□□□ -0.97
DDX56-211ENST00000479602 RHOAP61586 193 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 ZNF235Q14590 738 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 AGERQ15109 404 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 TEAD4Q15561 434 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 CST6Q15828 149 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 WHAMMP3Q1A5X7 153 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 MYLK3Q32MK0 819 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 TTC31Q49AM3 519 aaPredicted RBP8.98□□□□□ -0.97
DDX56-211ENST00000479602 ITPRIPL1Q6GPH6 555 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 NCEH1Q6PIU2 408 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 LAYNQ6UX15 382 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 DPY19L3Q6ZPD9 716 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 ARHGAP36Q6ZRI8 547 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 Q6ZVU0 165 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 TMPRSS12Q86WS5 348 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 MARCH9Q86YJ5 346 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 TP53INP2Q8IXH6 220 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 CNTD1Q8N815 330 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 PRELID2Q8N945 189 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 OR2T34Q8NGX1 318 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 MDM1Q8TC05 714 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 DTX3LQ8TDB6 740 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 COG1Q8WTW3 980 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 ASB12Q8WXK4 309 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 SPATA13Q96N96 652 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 FCRL5Q96RD9 977 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 MCCC1Q96RQ3 725 aaPredicted RBP8.98□□□□□ -0.97
DDX56-211ENST00000479602 LGMNQ99538 433 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 ELF4Q99607 663 aaPredicted RBP8.98□□□□□ -0.97
DDX56-211ENST00000479602 SPON2Q9BUD6 331 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 CINPQ9BW66 212 aaPredicted RBP8.98□□□□□ -0.97
DDX56-211ENST00000479602 GBA3Q9H227 469 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 ATP13A3Q9H7F0 1226 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 ERVMER34-1Q9H9K5 563 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 ARNT2Q9HBZ2 717 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 PCDH9Q9HC56 1237 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 EIF2B3Q9NR50 452 aaKnown RBP8.98□□□□□ -0.97
DDX56-211ENST00000479602 KCTD5Q9NXV2 234 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 NFKBIL1Q9UBC1 381 aaPredicted RBP8.98□□□□□ -0.97
DDX56-211ENST00000479602 CDC23Q9UJX2 597 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 HEY1Q9Y5J3 304 aa8.98□□□□□ -0.97
DDX56-211ENST00000479602 ADAMTS20P59510 1910 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 AREL1O15033 823 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 INSIG1O15503 277 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 CEP104O60308 925 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 PHF2O75151 1096 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 ANXA9O76027 345 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 FSBPO95073 299 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 C1SP09871 688 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 SERPINA4P29622 427 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 CCT8P50990 548 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 CDK16Q00536 496 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 ZBTB17Q13105 803 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 MPP3Q13368 585 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 ZNF211Q13398 564 aaPredicted RBP8.97□□□□□ -0.97
DDX56-211ENST00000479602 ZNF805Q5CZA5 627 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 PRAMEF14Q5SWL7 426 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 SRLQ86TD4 932 aa8.97□□□□□ -0.97
DDX56-211ENST00000479602 PDZD3Q86UT5 571 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms