RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 C1orf131Q8NDD1 294 aaKnown RBP4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 BEST2Q8NFU1 509 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 ARRDC2Q8TBH0 407 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 ERGIC1Q969X5 290 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 C7orf26Q96N11 449 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 LRFN5Q96NI6 719 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 ZNF570Q96NI8 536 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 ZPBPQ9BS86 351 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 MMTAG2Q9BU76 263 aaKnown RBP4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 SEZ6LQ9BYH1 1024 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 GLIS2Q9BZE0 524 aaPredicted RBP4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 PLEKHA4Q9H4M7 779 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 CISD1Q9NZ45 108 aaKnown RBP4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 AGO1Q9UL18 857 aaKnown RBP4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 UTYO14607 1347 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 NPIPB15A6NHN6 443 aaPredicted RBP4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 LACTBL1A8MY62 500 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 EIF3CLB5ME19 914 aaKnown RBP4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 SNAP23O00161 211 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 TIMM23O14925 209 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 SMAD6O43541 496 aaKnown RBP4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 KCNJ13O60928 360 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 SEC31AO94979 1220 aaKnown RBP4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 CH25HO95992 272 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 NGFRP08138 427 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 MMP2P08253 660 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 SPARCP09486 303 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 T-ENOLP0DO92 83 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 ITGAXP20702 1163 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 TNFAIP3P21580 790 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 CDAP32320 146 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 SHMT1P34896 483 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 PIGAP37287 484 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 THBS3P49746 956 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 KRTAP10-11P60412 298 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 RPL7AP62424 266 aaKnown RBP4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 DCTN2Q13561 401 aaKnown RBP4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 PLCB4Q15147 1175 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 HLFQ16534 295 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 CCDC184Q52MB2 194 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 LCTLQ6UWM7 567 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 CCDC129Q6ZRS4 1044 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 GSTA5Q7RTV2 222 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 MAATS1Q7Z4T9 603 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 CPLX4Q7Z7G2 160 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 TDRD7Q8NHU6 1098 aaKnown RBP4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 ETNPPLQ8TBG4 499 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 ELP5Q8TE02 316 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 FAM216AQ8WUB2 273 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 UCMAQ8WVF2 138 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 HDAC2Q92769 488 aaKnown RBP4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 PABPC5Q96DU9 382 aaKnown RBP4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 PHF21BQ96EK2 531 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 THOC3Q96J01 351 aaKnown RBP4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 ZNF479Q96JC4 524 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 PIP5K1AQ99755 562 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 SLC25A33Q9BSK2 321 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 RANBP17Q9H2T7 1088 aaKnown RBP4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 SMC4Q9NTJ3 1288 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 OLA1Q9NTK5 396 aaKnown RBP4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 HAO1Q9UJM8 370 aa4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 AAR2Q9Y312 384 aaKnown RBP4.03□□□□□ -1.76
SMARCA1-204ENST00000478420 DYTNA2CJ06 578 aa4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 LINC01553A4QN01 128 aa4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 J3KR12 359 aa4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 IFNL4K9M1U5 179 aa4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 WNT9BO14905 357 aa4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 CLEC3BP05452 202 aa4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 ACAA1P09110 424 aaPredicted RBP4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 NANOS2P60321 138 aaKnown RBP4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 FGFBP1Q14512 234 aa4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 TBCEQ15813 527 aaPredicted RBP4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 CCNG2Q16589 344 aa4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 SGO1Q5FBB7 561 aa4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 FBXO46Q6PJ61 603 aaPredicted RBP4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 ZNF517Q6ZMY9 492 aaPredicted RBP4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 LINGO2Q7L985 606 aa4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 SLC35F3Q8IY50 421 aa4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 ZBTB2Q8N680 514 aa4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 C9orf106Q8NAJ2 232 aa4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 AGBL3Q8NEM8 1001 aa4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 KCNG4Q8TDN1 519 aa4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 NEUROG1Q92886 237 aa4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 GTF3C6Q969F1 213 aa4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 SMARCE1Q969G3 411 aa4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 MARK4Q96L34 752 aa4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 SLITRK1Q96PX8 696 aa4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 HIPK2Q9H2X6 1198 aa4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 DDX4Q9NQI0 724 aaKnown RBP4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 SLC6A13Q9NSD5 602 aa4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 ORC3Q9UBD5 711 aaPredicted RBP4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 AASSQ9UDR5 926 aa4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 INTS6Q9UL03 887 aaKnown RBP4.02□□□□□ -1.77
SMARCA1-204ENST00000478420 TMEM202A6NGA9 273 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 TGFB1I1O43294 461 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 HSPA12AO43301 675 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 KCNAB3O43448 404 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 ZIC3O60481 467 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 RNASEH2AO75792 299 aaKnown RBP4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 CCNDBP1O95273 360 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms