RNA–Protein interactions for RNA: ENST00000478196.6

RPS27A-208, Transcript of ribosomal protein S27a, human

TSL 2

Gene RPS27A, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS27A-208	ENST00000478196	DLAT	P10515	647 aa	Known RBP	4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	EPCAM	P16422	314 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	ZFX	P17010	805 aa	Predicted RBP	4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	TYMP	P19971	482 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	CLCN4	P51793	760 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	SLC5A3	P53794	718 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	STX17	P56962	302 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	MYL6	P60660	151 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	TFAM	Q00059	246 aa	Known RBP	4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	MC2R	Q01718	297 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	LRRC63	Q05C16	580 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	ENPEP	Q07075	957 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	ELAVL2	Q12926	359 aa	Known RBP	4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	SMC1A	Q14683	1233 aa	Known RBP	4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	DHCR24	Q15392	516 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	ZACN	Q401N2	412 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	TOR2A	Q5JU69	321 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	SLC8B1	Q6J4K2	584 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	TRAPPC11	Q7Z392	1133 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	RBM23	Q86U06	439 aa	Known RBP	4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	CFAP52	Q8N1V2	620 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	MLKL	Q8NB16	471 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	BEST2	Q8NFU1	509 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	KBTBD7	Q8WVZ9	684 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	NELFB	Q8WX92	580 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	PPM1E	Q8WY54	764 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	SEMA4D	Q92854	862 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	SLC35C1	Q96A29	364 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	CCDC47	Q96A33	483 aa	Known RBP	4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	REPS1	Q96D71	796 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	PABPC5	Q96DU9	382 aa	Known RBP	4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	CCDC34	Q96HJ3	373 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	MSLNL	Q96KJ4	702 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	SENP8	Q96LD8	212 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	PKMYT1	Q99640	499 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	FUCA2	Q9BTY2	467 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	GTPBP4	Q9BZE4	634 aa	Known RBP	4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	S1PR5	Q9H228	398 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	HSD3B7	Q9H2F3	369 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	IFT22	Q9H7X7	185 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	TLE6	Q9H808	572 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	UBE2Z	Q9H832	354 aa	Predicted RBP	4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	ENTPD7	Q9NQZ7	604 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	MRPL17	Q9NRX2	175 aa	Known RBP	4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	GDAP2	Q9NXN4	497 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	FNIP2	Q9P278	1114 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	MTRR	Q9UBK8	725 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	STK39	Q9UEW8	545 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	ITGA11	Q9UKX5	1188 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	AGAP1	Q9UPQ3	857 aa		4.26	□□□□□ -1.73
RPS27A-208	ENST00000478196	MYOF	Q9NZM1	2061 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	CCDC187	A0A096LP49	1063 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	KPNA7	A9QM74	516 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	PRRT4	C9JH25	899 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	CYB561D2	O14569	222 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	GABRD	O14764	452 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	PSMA7	O14818	248 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	PMM2	O15305	246 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	SLC16A3	O15427	465 aa	Known RBP	4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	XPOT	O43592	962 aa	Known RBP	4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	HCRT	O43612	131 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	TRAPPC3	O43617	180 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	NCK2	O43639	380 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	SEC24A	O95486	1093 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	MBD3	O95983	291 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	ASS1	P00966	412 aa	Known RBP	4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	UROD	P06132	367 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	RHO	P08100	348 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	NDUFB7	P17568	137 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	TNNI1	P19237	187 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	GTF2H1	P32780	548 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	OR1D2	P34982	312 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	PSMC2	P35998	433 aa	Known RBP	4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	GCLM	P48507	274 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	TAF6	P49848	677 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	ZNF134	P52741	427 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	POU6F2	P78424	691 aa	Predicted RBP	4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	RBP5	P82980	135 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	FKBP3	Q00688	224 aa	Known RBP	4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	ROR1	Q01973	937 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	BFSP1	Q12934	665 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	TUBB3	Q13509	450 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	BMPR2	Q13873	1038 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	TRIP6	Q15654	476 aa	Known RBP	4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	PSMD5	Q16401	504 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	SOWAHA	Q2M3V2	549 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	KLHL40	Q2TBA0	621 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	LEXM	Q3ZCV2	418 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	CBWD6	Q4V339	395 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	PABPC1L	Q4VXU2	614 aa	Known RBP	4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	CBWD3	Q5JTY5	395 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	CBWD5	Q5RIA9	395 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	CCDC183	Q5T5S1	534 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	WSCD1	Q658N2	575 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	KLHL10	Q6JEL2	608 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	ANKRD54	Q6NXT1	300 aa		4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	C11orf57	Q6ZUT1	292 aa	Predicted RBP	4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	INTS8	Q75QN2	995 aa	Known RBP	4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	ZNF551	Q7Z340	670 aa	Predicted RBP	4.25	□□□□□ -1.73
RPS27A-208	ENST00000478196	PALB2	Q86YC2	1186 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms