RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 ACOX1Q15067 660 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 IGFBP7Q16270 282 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 UGP2Q16851 508 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 TMEM52BQ4KMG9 183 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 EFHC2Q5JST6 749 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 KCTD16Q68DU8 428 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 FOXR2Q6PJQ5 311 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 TMPRSS9Q7Z410 1059 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 DNAAF5Q86Y56 855 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 FAM71AQ8IYT1 594 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 PLA2G15Q8NCC3 412 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 CCDC112Q8NEF3 446 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 GPR156Q8NFN8 814 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 CCL4L1Q8NHW4 92 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 ZNF564Q8TBZ8 553 aaPredicted RBP6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 KIAA1524Q8TCG1 905 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 GPT2Q8TD30 523 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 FAM172AQ8WUF8 416 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 RXFP2Q8WXD0 754 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 OR1E3Q8WZA6 343 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 CCDC74BQ96LY2 380 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 RBM15Q96T37 977 aaKnown RBP eCLIP6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 NUDT22Q9BRQ3 303 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 C11orf70Q9BRQ4 267 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 MFRPQ9BY79 579 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 KLC2Q9H0B6 622 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 TMEM168Q9H0V1 697 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 EPN3Q9H201 632 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 CARS2Q9HA77 564 aaKnown RBP6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 FGF22Q9HCT0 170 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 SIX2Q9NPC8 291 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 ZNF71Q9NQZ8 489 aaPredicted RBP6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 SEPT11Q9NVA2 429 aaKnown RBP6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 TMEM51Q9NW97 253 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 GEMIN8Q9NWZ8 242 aaKnown RBP6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 UBA2Q9UBT2 640 aaPredicted RBP6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 RWDD2AQ9UIY3 292 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 APPL1Q9UKG1 709 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 ACSL6Q9UKU0 697 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 FHOD1Q9Y613 1164 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 FLNCQ14315 2725 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 RASA4BC9J798 803 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 RASA4O43374 803 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 NUDT21O43809 227 aaKnown RBP6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 RECQL5O94762 991 aaPredicted RBP6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 LSM8O95777 96 aaKnown RBP6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 GP1BBP13224 206 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 LIFP15018 202 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 SERPINA4P29622 427 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 CDH5P33151 784 aaPredicted RBP6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 CSTF2P33240 577 aaKnown RBP eCLIP6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 MMP12P39900 470 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 NOP2P46087 812 aaKnown RBP6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 GNPDA1P46926 289 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 SUOXP51687 545 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 NOMO3P69849 1222 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 ZFP36L1Q07352 338 aaKnown RBP6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 ILF3Q12906 894 aaKnown RBP eCLIP6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 HLTFQ14527 1009 aaKnown RBP eCLIP6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 GRM3Q14832 879 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 NCAPHQ15003 741 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 CAMK4Q16566 473 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 MAN2A1Q16706 1144 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 TSR1Q2NL82 804 aaKnown RBP6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 CCDC14Q49A88 953 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 SNAP47Q5SQN1 464 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 MANEALQ5VSG8 457 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 NKAIN2Q5VXU1 208 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 DOK6Q6PKX4 331 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 SLC30A9Q6PML9 568 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 KDELC2Q7Z4H8 507 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 SLFN11Q7Z7L1 901 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 NOP9Q86U38 636 aaKnown RBP6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 NLRP14Q86W24 1093 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 CAMK1DQ8IU85 385 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 SLITRK4Q8IW52 837 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 FAM114A1Q8IWE2 563 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 CACNA2D3Q8IZS8 1091 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 PYROXD2Q8N2H3 581 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 JOSD2Q8TAC2 188 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 SLC30A5Q8TAD4 765 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 C9orf43Q8TAL5 461 aaPredicted RBP6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 ZDHHC1Q8WTX9 485 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 PDCD6IPQ8WUM4 868 aaKnown RBP6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 CASKIN2Q8WXE0 1202 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 ART4Q93070 314 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 PMEPA1Q969W9 287 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 FUBP1Q96AE4 644 aaKnown RBP6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 KIAA1143Q96AT1 154 aaPredicted RBP6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 AHCYL2Q96HN2 611 aaKnown RBP6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 TAAR9Q96RI9 348 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 SEMA3CQ99985 751 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 SELENOOQ9BVL4 669 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 GSDMCQ9BYG8 508 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 ADNPQ9H2P0 1102 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 SUV39H2Q9H5I1 410 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 WDR26Q9H7D7 661 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 CATSPERBQ9H7T0 1116 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 GPN2Q9H9Y4 310 aaPredicted RBP6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 SLC39A1Q9NY26 324 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms