RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 RRP7BPQ9NSQ0 103 aa6.15□□□□□ -1.42
VPS50-212ENST00000476413 FBXL17Q9UF56 701 aa6.15□□□□□ -1.42
VPS50-212ENST00000476413 TMEM5Q9Y2B1 443 aa6.15□□□□□ -1.42
VPS50-212ENST00000476413 NFE2L3Q9Y4A8 694 aa6.15□□□□□ -1.42
VPS50-212ENST00000476413 SCAMP1O15126 338 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 P4HA2O15460 535 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 HCRTR2O43614 444 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 TUBBP07437 444 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 NR2F1P10589 423 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 IL11P20809 199 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 COMPP49747 757 aaPredicted RBP6.14□□□□□ -1.43
VPS50-212ENST00000476413 CDH12P55289 794 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 SELENOVP59797 346 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 C2orf68Q2NKX9 166 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 CDONQ4KMG0 1287 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 SOWAHCQ53LP3 525 aaPredicted RBP6.14□□□□□ -1.43
VPS50-212ENST00000476413 KRBA2Q6ZNG9 492 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 GSTA5Q7RTV2 222 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 HAPLN4Q86UW8 402 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 ZBTB2Q8N680 514 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 INPP5DQ92835 1189 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 PGAM5Q96HS1 289 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 FEM1CQ96JP0 617 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 SLC41A2Q96JW4 573 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 SLITRK1Q96PX8 696 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 FAM110AQ9BQ89 295 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 POLDIP3Q9BY77 421 aaKnown RBP6.14□□□□□ -1.43
VPS50-212ENST00000476413 SMARCAD1Q9H4L7 1026 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 RANGRFQ9HD47 186 aaPredicted RBP6.14□□□□□ -1.43
VPS50-212ENST00000476413 HEY2Q9UBP5 337 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 RPS6KA6Q9UK32 745 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 MTMR6Q9Y217 621 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 CEPT1Q9Y6K0 416 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 SESN1Q9Y6P5 492 aa6.14□□□□□ -1.43
VPS50-212ENST00000476413 GAGE12JA6NER3 117 aa6.13□□□□□ -1.43
VPS50-212ENST00000476413 ENTPD3O75355 529 aa6.13□□□□□ -1.43
VPS50-212ENST00000476413 RGS11O94810 467 aa6.13□□□□□ -1.43
VPS50-212ENST00000476413 EPN2O95208 641 aa6.13□□□□□ -1.43
VPS50-212ENST00000476413 KLKB1P03952 638 aa6.13□□□□□ -1.43
VPS50-212ENST00000476413 MMP2P08253 660 aa6.13□□□□□ -1.43
VPS50-212ENST00000476413 GCH1P30793 250 aa6.13□□□□□ -1.43
VPS50-212ENST00000476413 USP41Q3LFD5 358 aa6.13□□□□□ -1.43
VPS50-212ENST00000476413 ODF3L2Q3SX64 289 aa6.13□□□□□ -1.43
VPS50-212ENST00000476413 C6orf141Q5SZD1 244 aa6.13□□□□□ -1.43
VPS50-212ENST00000476413 PMS2CLQ68D20 193 aa6.13□□□□□ -1.43
VPS50-212ENST00000476413 CFAP77Q6ZQR2 320 aa6.13□□□□□ -1.43
VPS50-212ENST00000476413 TICAM1Q8IUC6 712 aa6.13□□□□□ -1.43
VPS50-212ENST00000476413 SFTPA2Q8IWL1 248 aa6.13□□□□□ -1.43
VPS50-212ENST00000476413 SCML4Q8N228 414 aa6.13□□□□□ -1.43
VPS50-212ENST00000476413 TMEM163Q8TC26 289 aa6.13□□□□□ -1.43
VPS50-212ENST00000476413 ELMOD3Q96FG2 381 aa6.13□□□□□ -1.43
VPS50-212ENST00000476413 SRSF8Q9BRL6 282 aaKnown RBP6.13□□□□□ -1.43
VPS50-212ENST00000476413 TASP1Q9H6P5 420 aa6.13□□□□□ -1.43
VPS50-212ENST00000476413 PDE7BQ9NP56 450 aa6.13□□□□□ -1.43
VPS50-212ENST00000476413 CYSLTR2Q9NS75 346 aa6.13□□□□□ -1.43
VPS50-212ENST00000476413 SETD4Q9NVD3 440 aa6.13□□□□□ -1.43
VPS50-212ENST00000476413 LDB2O43679 373 aa6.12□□□□□ -1.43
VPS50-212ENST00000476413 RB1P06400 928 aa6.12□□□□□ -1.43
VPS50-212ENST00000476413 TFPIP10646 304 aa6.12□□□□□ -1.43
VPS50-212ENST00000476413 SELLP14151 372 aa6.12□□□□□ -1.43
VPS50-212ENST00000476413 ZNF182P17025 639 aaPredicted RBP6.12□□□□□ -1.43
VPS50-212ENST00000476413 TNFRSF1BP20333 461 aa6.12□□□□□ -1.43
VPS50-212ENST00000476413 KELP23276 732 aa6.12□□□□□ -1.43
VPS50-212ENST00000476413 KRT20P35900 424 aa6.12□□□□□ -1.43
VPS50-212ENST00000476413 EIF2DP41214 584 aaKnown RBP6.12□□□□□ -1.43
VPS50-212ENST00000476413 ARHGEF6Q15052 776 aa6.12□□□□□ -1.43
VPS50-212ENST00000476413 Q5PR19 223 aa6.12□□□□□ -1.43
VPS50-212ENST00000476413 PLEKHA7Q6IQ23 1121 aa6.12□□□□□ -1.43
VPS50-212ENST00000476413 ANKRD54Q6NXT1 300 aa6.12□□□□□ -1.43
VPS50-212ENST00000476413 PDXDC1Q6P996 788 aa6.12□□□□□ -1.43
VPS50-212ENST00000476413 SLC16A12Q6ZSM3 486 aa6.12□□□□□ -1.43
VPS50-212ENST00000476413 SEPT14Q6ZU15 432 aa6.12□□□□□ -1.43
VPS50-212ENST00000476413 LINGO2Q7L985 606 aa6.12□□□□□ -1.43
VPS50-212ENST00000476413 CAMK1DQ8IU85 385 aa6.12□□□□□ -1.43
VPS50-212ENST00000476413 WDR63Q8IWG1 891 aa6.12□□□□□ -1.43
VPS50-212ENST00000476413 TAGAPQ8N103 731 aa6.12□□□□□ -1.43
VPS50-212ENST00000476413 BEST2Q8NFU1 509 aa6.12□□□□□ -1.43
VPS50-212ENST00000476413 SGCDQ92629 289 aa6.12□□□□□ -1.43
VPS50-212ENST00000476413 OR2A14Q96R47 310 aa6.12□□□□□ -1.43
VPS50-212ENST00000476413 SLF1Q9BQI6 1058 aa6.12□□□□□ -1.43
VPS50-212ENST00000476413 MAK16Q9BXY0 300 aaKnown RBP6.12□□□□□ -1.43
VPS50-212ENST00000476413 WSB2Q9NYS7 404 aaPredicted RBP6.12□□□□□ -1.43
VPS50-212ENST00000476413 TMEM272A0A1B0GTI8 110 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 I6L893 689 aaPredicted RBP6.11□□□□□ -1.43
VPS50-212ENST00000476413 CHL1O00533 1208 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 NDUFS3O75489 264 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 SLC25A12O75746 678 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 NDUFB8O95169 186 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 FTCDO95954 541 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 DNTTP04053 509 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 GNLYP22749 145 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 RRM1P23921 792 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 CHATP28329 748 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 HOXA13P31271 388 aaPredicted RBP6.11□□□□□ -1.43
VPS50-212ENST00000476413 THPOP40225 353 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 RASSF2P50749 326 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 PMS2P54278 862 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 SRSF4Q08170 494 aaKnown RBP6.11□□□□□ -1.43
VPS50-212ENST00000476413 TRIP6Q15654 476 aaKnown RBP6.11□□□□□ -1.43
VPS50-212ENST00000476413 KRT24Q2M2I5 525 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms