RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 CAMKMTQ7Z624 323 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 HOOK3Q86VS8 718 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 WDR63Q8IWG1 891 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 PEX5LQ8IYB4 626 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 CCDC13Q8IYE1 715 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 LINC01465Q8N7H1 131 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 SCAIQ8N9R8 606 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 TC2NQ8N9U0 490 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 CAMKVQ8NCB2 501 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 FIBINQ8TAL6 211 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 MOAP1Q96BY2 351 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 HDAC11Q96DB2 347 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 ARHGEF26Q96DR7 871 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 KAZALD1Q96I82 304 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 COQ10AQ96MF6 247 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 CFAP57Q96MR6 1250 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 GPR78Q96P69 363 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 MGME1Q9BQP7 344 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 ABHD14AQ9BUJ0 271 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 NUP85Q9BW27 656 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 C1QTNF3Q9BXJ4 246 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 TRIM2Q9C040 744 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 TSPY26PQ9H489 355 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 MID1IP1Q9NPA3 183 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 MBNL1Q9NR56 388 aaKnown RBP4.31□□□□□ -1.72
VPS13D-207ENST00000476169 ASAH2Q9NR71 780 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 SLC22A11Q9NSA0 550 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 ABCB8Q9NUT2 735 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 SETD4Q9NVD3 440 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 ASNSD1Q9NWL6 643 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 CHCHD3Q9NX63 227 aaKnown RBP4.31□□□□□ -1.72
VPS13D-207ENST00000476169 PLK2Q9NYY3 685 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 ARMCX3Q9UH62 379 aaPredicted RBP4.31□□□□□ -1.72
VPS13D-207ENST00000476169 TBK1Q9UHD2 729 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 SH3BGRL2Q9UJC5 107 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 RABL2BQ9UNT1 228 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 B3GNT3Q9Y2A9 372 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 R3HDM2Q9Y2K5 976 aaKnown RBP4.31□□□□□ -1.72
VPS13D-207ENST00000476169 SPATA31A1Q5TZJ5 1347 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 IGSF1Q8N6C5 1336 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 TCRBV21S2A2A0A5A6 115 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 OR6C68A6NDL8 312 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 CLIC1O00299 241 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 PRYO14603 147 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 PGRMC2O15173 223 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 GPC4O75487 556 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 ESRRBO95718 433 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 BCL10O95999 233 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 ELFN1P0C7U0 828 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 HOXB9P17482 250 aaPredicted RBP4.3□□□□□ -1.72
VPS13D-207ENST00000476169 CTPS1P17812 591 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 EDN2P20800 178 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 DRD4P21917 467 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 RFC1P35251 1148 aaPredicted RBP4.3□□□□□ -1.72
VPS13D-207ENST00000476169 MPLP40238 635 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 NT5C2P49902 561 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 PNLIPRP2P54317 469 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 CYP4F2P78329 520 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 FGFBP1Q14512 234 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 RNPS1Q15287 305 aaKnown RBP4.3□□□□□ -1.72
VPS13D-207ENST00000476169 HYAL4Q2M3T9 481 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 ALG11Q2TAA5 492 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 FAM153CQ494X1 144 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 FBLN7Q53RD9 439 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 TMEM63BQ5T3F8 832 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 TMEM65Q6PI78 240 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 Q6YL49 198 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 DCDC5Q6ZRR9 648 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 MSANTD1Q6ZTZ1 278 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 SLC29A4Q7RTT9 530 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 PRSS45Q7RTY3 260 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 BCDIN3DQ7Z5W3 292 aaKnown RBP4.3□□□□□ -1.72
VPS13D-207ENST00000476169 AACSQ86V21 672 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 KLHL7Q8IXQ5 586 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 ADGRF3Q8IZF5 1079 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 MMP21Q8N119 569 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 AMER2Q8N7J2 671 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 PI4KAP1Q8N8J0 262 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 TERB1Q8NA31 727 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 XXYLT1Q8NBI6 393 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 LINC00476Q8WZB0 136 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 PABPC5Q96DU9 382 aaKnown RBP4.3□□□□□ -1.72
VPS13D-207ENST00000476169 DAZAP1Q96EP5 407 aaKnown RBP4.3□□□□□ -1.72
VPS13D-207ENST00000476169 ZNF503Q96F45 646 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 PPP1R13BQ96KQ4 1090 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 PRAM1Q96QH2 718 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 AGAP2Q99490 1192 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 MACROD1Q9BQ69 325 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 SLC25A23Q9BV35 468 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 IFT27Q9BW83 186 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 GLIS2Q9BZE0 524 aaPredicted RBP4.3□□□□□ -1.72
VPS13D-207ENST00000476169 SLC5A7Q9GZV3 580 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.3□□□□□ -1.72
VPS13D-207ENST00000476169 NRIP3Q9NQ35 241 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 SYBUQ9NX95 663 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 WSB2Q9NYS7 404 aaPredicted RBP4.3□□□□□ -1.72
VPS13D-207ENST00000476169 RAPGEFL1Q9UHV5 662 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 KCNK7Q9Y2U2 307 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 FAM96BQ9Y3D0 163 aa4.3□□□□□ -1.72
VPS13D-207ENST00000476169 PKP3Q9Y446 797 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms