RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 ATP13A4Q4VNC1 1196 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 ESRP1Q6NXG1 681 aaKnown RBP15.24■□□□□ 0.03
VARS-223ENST00000474643 RAD9BQ6WBX8 426 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 MACC1Q6ZN28 852 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 EFL1Q7Z2Z2 1120 aaKnown RBP15.24■□□□□ 0.03
VARS-223ENST00000474643 RD3Q7Z3Z2 195 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 TXLNBQ8N3L3 684 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 LZTR1Q8N653 840 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 DCBLD1Q8N8Z6 715 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 FAM181AQ8N9Y4 354 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 NSMCE1Q8WV22 266 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 ZNF641Q96N77 438 aaPredicted RBP15.24■□□□□ 0.03
VARS-223ENST00000474643 TUBGCP5Q96RT8 1024 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 KLF6Q99612 283 aaPredicted RBP15.24■□□□□ 0.03
VARS-223ENST00000474643 SLC39A8Q9C0K1 460 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 LHX3Q9UBR4 397 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 TFR2Q9UP52 801 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 COQ6Q9Y2Z9 468 aa15.24■□□□□ 0.03
VARS-223ENST00000474643 ITPR1Q14643 2758 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 A0A087WV48 116 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 LRRD1A4D1F6 860 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 J3KR12 359 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 TOR1BO14657 336 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 MUSKO15146 869 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 ARHGAP6O43182 974 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 USP12O75317 370 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 CSO75390 466 aaKnown RBP15.23■□□□□ 0.03
VARS-223ENST00000474643 PCCBP05166 539 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 NFKBIAP25963 317 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 POLR2LP62875 67 aaKnown RBP15.23■□□□□ 0.03
VARS-223ENST00000474643 MMRN1Q13201 1228 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 C1orf61Q13536 156 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 ZNF235Q14590 738 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 RTP5Q14D33 572 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 IRF4Q15306 451 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 CYTH1Q15438 398 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 UGP2Q16851 508 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 CAMK1DQ8IU85 385 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 TMEM139Q8IV31 216 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 HID1Q8IV36 788 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 RBFAQ8N0V3 343 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 BBS5Q8N3I7 341 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 ACRBPQ8NEB7 543 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 HCAR2Q8TDS4 363 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 NAT6Q93015 286 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 CENPTQ96BT3 561 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 LGMNQ99538 433 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 LRRC19Q9H756 370 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 PCDH12Q9NPG4 1184 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 GPR27Q9NS67 375 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 RCOR3Q9P2K3 495 aaPredicted RBP15.23■□□□□ 0.03
VARS-223ENST00000474643 ATP8A1Q9Y2Q0 1164 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 HYOU1Q9Y4L1 999 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 ADAMTS20P59510 1910 aa15.23■□□□□ 0.03
VARS-223ENST00000474643 TDRD6O60522 2096 aaKnown RBP15.23■□□□□ 0.03
VARS-223ENST00000474643 CACNA1GO43497 2377 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 NBEAQ8NFP9 2946 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 A0A0A6YYK5 440 aaPredicted RBP15.22■□□□□ 0.03
VARS-223ENST00000474643 SPINT1O43278 529 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 KRT1P04264 644 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 CD48P09326 243 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 ALPIP09923 528 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 ELFN1P0C7U0 828 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 C6P13671 934 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 ITIH2P19823 946 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 COMTP21964 271 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 LIG3P49916 1009 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 RENBPP51606 427 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 GABREP78334 506 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 EIF2B5Q13144 721 aaKnown RBP15.22■□□□□ 0.03
VARS-223ENST00000474643 DPYSL3Q14195 570 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 RFTN1Q14699 578 aaPredicted RBP15.22■□□□□ 0.03
VARS-223ENST00000474643 ELOCQ15369 112 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 TCEA2Q15560 299 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 CRTC1Q6UUV9 634 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 ENPP7Q6UWV6 458 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 SRLQ86TD4 932 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 RHOT1Q8IXI2 618 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 LSMEM2Q8N112 164 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 CACTIN-AS1Q8N1I8 211 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 FSTL5Q8N475 847 aaPredicted RBP15.22■□□□□ 0.03
VARS-223ENST00000474643 NPWQ8N729 165 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 TSEN2Q8NCE0 465 aaKnown RBP15.22■□□□□ 0.03
VARS-223ENST00000474643 TPCN2Q8NHX9 752 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.22■□□□□ 0.03
VARS-223ENST00000474643 PDCD6IPQ8WUM4 868 aaKnown RBP15.22■□□□□ 0.03
VARS-223ENST00000474643 FGF11Q92914 225 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 MAK16Q9BXY0 300 aaKnown RBP15.22■□□□□ 0.03
VARS-223ENST00000474643 MBNL1Q9NR56 388 aaKnown RBP15.22■□□□□ 0.03
VARS-223ENST00000474643 GULP1Q9UBP9 304 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 KLQ9UEF7 1012 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 SEPT3Q9UH03 358 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 SALL4Q9UJQ4 1053 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 PCDHB1Q9Y5F3 818 aa15.22■□□□□ 0.03
VARS-223ENST00000474643 TPP1O14773 563 aa15.21■□□□□ 0.03
VARS-223ENST00000474643 BUB1BO60566 1050 aaPredicted RBP15.21■□□□□ 0.03
VARS-223ENST00000474643 RASGRP1O95267 797 aa15.21■□□□□ 0.03
VARS-223ENST00000474643 MPOP05164 745 aa15.21■□□□□ 0.03
VARS-223ENST00000474643 SCNN1BP51168 640 aa15.21■□□□□ 0.03
VARS-223ENST00000474643 VAV2P52735 878 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms