RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 TRAPPC8Q9Y2L5 1435 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 A0A0A0MQY5 61 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 A0A0G2JLW4 131 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 SMIM1B2RUZ4 78 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 TFRCP02786 760 aaKnown RBP1.86□□□□□ -2.11
CCDC39-203ENST00000473854 CBLP22681 906 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 HOXA13P31271 388 aaPredicted RBP1.86□□□□□ -2.11
CCDC39-203ENST00000473854 RCAN1P53805 252 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 RELQ04864 619 aaPredicted RBP1.86□□□□□ -2.11
CCDC39-203ENST00000473854 GAGE5Q13069 117 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 GAGE6Q13070 117 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 SEMA5AQ13591 1074 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 LPIN1Q14693 890 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 PPP6R3Q5H9R7 873 aaPredicted RBP1.86□□□□□ -2.11
CCDC39-203ENST00000473854 KLHDC7AQ5VTJ3 777 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 HIBCHQ6NVY1 386 aaPredicted RBP1.86□□□□□ -2.11
CCDC39-203ENST00000473854 CHST15Q7LFX5 561 aaPredicted RBP1.86□□□□□ -2.11
CCDC39-203ENST00000473854 ADIPOR2Q86V24 386 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 KMT5CQ86Y97 462 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 DENND6AQ8IWF6 608 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 SFTPA2Q8IWL1 248 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.86□□□□□ -2.11
CCDC39-203ENST00000473854 MAGEB6Q8N7X4 407 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 MCPH1Q8NEM0 835 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 MOCOSQ96EN8 888 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 MCRS1Q96EZ8 462 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 CSF3RQ99062 836 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 CABLES2Q9BTV7 478 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 COLEC11Q9BWP8 271 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 APOL5Q9BWW9 433 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 MVB12BQ9H7P6 319 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 PELI2Q9HAT8 420 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 GRHL1Q9NZI5 618 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 SLC9A2Q9UBY0 812 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 FAF1Q9UNN5 650 aaPredicted RBP1.86□□□□□ -2.11
CCDC39-203ENST00000473854 CORO2BQ9UQ03 480 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 DHDHQ9UQ10 334 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 THRAP3Q9Y2W1 955 aaKnown RBP1.86□□□□□ -2.11
CCDC39-203ENST00000473854 PCDHGB6Q9Y5F9 930 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 ATP10AO60312 1499 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 PLA2R1Q13018 1463 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 RALGAPBQ86X10 1494 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 PLEKHH2Q8IVE3 1493 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 VIRMAQ69YN4 1812 aaKnown RBP1.86□□□□□ -2.11
CCDC39-203ENST00000473854 KDM5AP29375 1690 aaKnown RBP1.86□□□□□ -2.11
CCDC39-203ENST00000473854 ADGRB3O60242 1522 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 KIF15Q9NS87 1388 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 PLCH2O75038 1416 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 POGZQ7Z3K3 1410 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 ERBINQ96RT1 1412 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 ANKRD50Q9ULJ7 1429 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 KIAA1107Q9UPP5 1409 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 KIF20BQ96Q89 1820 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 VSTM5A8MXK1 200 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 KLLNB2CW77 178 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 AKR1B15C9JRZ8 316 aaPredicted RBP1.85□□□□□ -2.11
CCDC39-203ENST00000473854 J3KR12 359 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 HSPA12AO43301 675 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 RPP40O75818 363 aaKnown RBP1.85□□□□□ -2.11
CCDC39-203ENST00000473854 SCGB1D2O95969 90 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 ANXA6P08133 673 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 PEPDP12955 493 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 TLX1P31314 330 aaPredicted RBP1.85□□□□□ -2.11
CCDC39-203ENST00000473854 ALDH18A1P54886 795 aaKnown RBP1.85□□□□□ -2.11
CCDC39-203ENST00000473854 FAM3BP58499 235 aaPredicted RBP1.85□□□□□ -2.11
CCDC39-203ENST00000473854 IGBP1P78318 339 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 TBL3Q12788 808 aaKnown RBP1.85□□□□□ -2.11
CCDC39-203ENST00000473854 GRM3Q14832 879 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 PPP2R5AQ15172 486 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 TBRG1Q3YBR2 411 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 TBC1D9BQ66K14 1250 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 NXNQ6DKJ4 435 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 TRNP1Q6NT89 227 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 TRIM65Q6PJ69 517 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 FAM198BQ6UWH4 519 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 C15orf39Q6ZRI6 1047 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 RAPH1Q70E73 1250 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 HAPLN4Q86UW8 402 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 TCEAL8Q8IYN2 117 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 NRSN1Q8IZ57 195 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 CCDC33Q8N5R6 958 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 ZMIZ2Q8NF64 920 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 SPATA22Q8NHS9 363 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 ZNF473Q8WTR7 871 aaKnown RBP1.85□□□□□ -2.11
CCDC39-203ENST00000473854 SIN3AQ96ST3 1273 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 HDHD5Q9BXW7 423 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 PDE11AQ9HCR9 933 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 RRP7BPQ9NSQ0 103 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 KCNS2Q9ULS6 477 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 FANCAO15360 1455 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 ADGRL1O94910 1474 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 A2MP01023 1474 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 KNDC1Q76NI1 1749 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 ABCC3O15438 1527 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 LMTK2Q8IWU2 1503 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 NEURL4Q96JN8 1562 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 REREQ9P2R6 1566 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 ANKRD30BQ9BXX2 1392 aa1.85□□□□□ -2.11
CCDC39-203ENST00000473854 NRXN3Q9Y4C0 1643 aa1.84□□□□□ -2.11
CCDC39-203ENST00000473854 C3P01024 1663 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms