RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 SLC22A17Q8WUG5 538 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 HSFY1Q96LI6 401 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 TMEM175Q9BSA9 504 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 SERHL2Q9H4I8 314 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 SGK2Q9HBY8 427 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 SERHLQ9NQF3 203 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 C19orf25Q9UFG5 118 aaPredicted RBP8.61□□□□□ -1.03
CD47-204ENST00000471694 CIDEBQ9UHD4 219 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 VPS4AQ9UN37 437 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 ANKRD6Q9Y2G4 727 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 FCF1Q9Y324 198 aaKnown RBP8.61□□□□□ -1.03
CD47-204ENST00000471694 WASHC1A8K0Z3 465 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 WASH3PC4AMC7 463 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 RGS5O15539 181 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 ERCC1P07992 297 aaPredicted RBP8.61□□□□□ -1.03
CD47-204ENST00000471694 NR1I3Q14994 352 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 LRRC36Q1X8D7 754 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 CDC73Q6P1J9 531 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 WASH2PQ6VEQ5 465 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 BEND5Q7L4P6 421 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 NKAPQ8N5F7 415 aaKnown RBP8.61□□□□□ -1.03
CD47-204ENST00000471694 PACSIN1Q9BY11 444 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 EPS8L2Q9H6S3 715 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 GKN1Q9NS71 199 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 DKKL1Q9UK85 242 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 LDB2O43679 373 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 B3GALT2O43825 422 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 CDC40O60508 579 aaKnown RBP eCLIP8.61□□□□□ -1.03
CD47-204ENST00000471694 CSF2RAP15509 400 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 GSSP48637 474 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 GRIK5Q16478 980 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 SLC9B2Q86UD5 537 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 SLC41A1Q8IVJ1 513 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 CCDC54Q8NEL0 328 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 OR4A15Q8NGL6 344 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 ASZ1Q8WWH4 475 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 DNASE1L2Q92874 299 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 AARSD1Q9BTE6 412 aaKnown RBP8.61□□□□□ -1.03
CD47-204ENST00000471694 WDR26Q9H7D7 661 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 FBXO6Q9NRD1 293 aaPredicted RBP8.61□□□□□ -1.03
CD47-204ENST00000471694 SEMA3GQ9NS98 782 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 DDX28Q9NUL7 540 aaKnown RBP8.61□□□□□ -1.03
CD47-204ENST00000471694 MTO1Q9Y2Z2 717 aaKnown RBP8.61□□□□□ -1.03
CD47-204ENST00000471694 A0A1W2PQJ5 194 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 TRAFD1O14545 582 aaPredicted RBP8.6□□□□□ -1.03
CD47-204ENST00000471694 NBNO60934 754 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 ECDO95905 644 aaPredicted RBP8.6□□□□□ -1.03
CD47-204ENST00000471694 AGTP01019 485 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 NTRK1P04629 796 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 HEXBP07686 556 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 ZNF132P52740 706 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 MRPS5P82675 430 aaKnown RBP8.6□□□□□ -1.03
CD47-204ENST00000471694 COX10Q12887 443 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 LSM12Q3MHD2 195 aaKnown RBP8.6□□□□□ -1.03
CD47-204ENST00000471694 ARSIQ5FYB1 569 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 LRRC6Q86X45 466 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 RNF168Q8IYW5 571 aaPredicted RBP8.6□□□□□ -1.03
CD47-204ENST00000471694 TPCN2Q8NHX9 752 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 FAM163AQ96GL9 167 aaPredicted RBP8.6□□□□□ -1.03
CD47-204ENST00000471694 FCRL2Q96LA5 508 aaPredicted RBP8.6□□□□□ -1.03
CD47-204ENST00000471694 ROGDIQ9GZN7 287 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 GDF3Q9NR23 364 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 PCDHGC5Q9Y5F6 944 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 DAB1O75553 588 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 UGT1A1P22309 533 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 PSMB4P28070 264 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 PEX19P40855 299 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 HSDL1Q3SXM5 330 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 C6orf132Q5T0Z8 1188 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 ECHDC2Q86YB7 292 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 MCOLN2Q8IZK6 566 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 RIBC1Q8N443 379 aaPredicted RBP8.6□□□□□ -1.03
CD47-204ENST00000471694 RP9Q8TA86 221 aaKnown RBP8.6□□□□□ -1.03
CD47-204ENST00000471694 SETD6Q8TBK2 473 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 MAPK15Q8TD08 544 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 RUBCNQ92622 972 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 P2RY13Q9BPV8 354 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 EBF3Q9H4W6 596 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 ETNK1Q9HBU6 452 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 SERTAD3Q9UJW9 196 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 SLC45A1Q9Y2W3 748 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 BCLAF3A2AJT9 711 aaKnown RBP8.6□□□□□ -1.03
CD47-204ENST00000471694 FAM221BA6H8Z2 402 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 MYL12AP19105 171 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 MIPP30301 263 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 SPAM1P38567 509 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 ST13P50502 369 aaKnown RBP8.6□□□□□ -1.03
CD47-204ENST00000471694 SLC29A4Q7RTT9 530 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 SPATA21Q7Z572 469 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 C12orf29Q8N999 325 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 GPER1Q99527 375 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 PRDM12Q9H4Q4 367 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 KCTD5Q9NXV2 234 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 MAPRE3Q9UPY8 281 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 SH3GLB1Q9Y371 365 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 OR2AG2A6NM03 316 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 ZNF208O43345 1280 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 TLX3O43711 291 aaPredicted RBP8.6□□□□□ -1.03
CD47-204ENST00000471694 OR1F1O43749 312 aa8.6□□□□□ -1.03
CD47-204ENST00000471694 PRG2P13727 222 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms