RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 IGHV1OR21-1A0A087WYE8 117 aa12.06□□□□□ -0.48
LSM2-209ENST00000470083 TCP11X1B4DZS4 312 aa12.06□□□□□ -0.48
LSM2-209ENST00000470083 CACNB4O00305 520 aaPredicted RBP12.06□□□□□ -0.48
LSM2-209ENST00000470083 PMM2O15305 246 aa12.06□□□□□ -0.48
LSM2-209ENST00000470083 DAB1O75553 588 aa12.06□□□□□ -0.48
LSM2-209ENST00000470083 SORBS2O94875 1100 aaKnown RBP12.06□□□□□ -0.48
LSM2-209ENST00000470083 KELP23276 732 aa12.06□□□□□ -0.48
LSM2-209ENST00000470083 MPSTP25325 297 aa12.06□□□□□ -0.48
LSM2-209ENST00000470083 ETFBP38117 255 aa12.06□□□□□ -0.48
LSM2-209ENST00000470083 FMO5P49326 533 aa12.06□□□□□ -0.48
LSM2-209ENST00000470083 MC2RQ01718 297 aa12.06□□□□□ -0.48
LSM2-209ENST00000470083 DPYDQ12882 1025 aa12.06□□□□□ -0.48
LSM2-209ENST00000470083 MRPL49Q13405 166 aaKnown RBP12.06□□□□□ -0.48
LSM2-209ENST00000470083 NKAIN2Q5VXU1 208 aa12.06□□□□□ -0.48
LSM2-209ENST00000470083 CEACAM20Q6UY09 585 aa12.06□□□□□ -0.48
LSM2-209ENST00000470083 RRAGAQ7L523 313 aa12.06□□□□□ -0.48
LSM2-209ENST00000470083 SLC34A3Q8N130 599 aa12.06□□□□□ -0.48
LSM2-209ENST00000470083 ESX1Q8N693 406 aa12.06□□□□□ -0.48
LSM2-209ENST00000470083 ZDHHC1Q8WTX9 485 aa12.06□□□□□ -0.48
LSM2-209ENST00000470083 FUBP1Q96AE4 644 aaKnown RBP12.06□□□□□ -0.48
LSM2-209ENST00000470083 TCTN2Q96GX1 697 aa12.06□□□□□ -0.48
LSM2-209ENST00000470083 CPXM1Q96SM3 734 aa12.06□□□□□ -0.48
LSM2-209ENST00000470083 SPATS2LQ9NUQ6 558 aaKnown RBP12.06□□□□□ -0.48
LSM2-209ENST00000470083 TMEM9Q9P0T7 183 aa12.06□□□□□ -0.48
LSM2-209ENST00000470083 PDP2Q9P2J9 529 aa12.06□□□□□ -0.48
LSM2-209ENST00000470083 ARMCX3Q9UH62 379 aaPredicted RBP12.06□□□□□ -0.48
LSM2-209ENST00000470083 ERRFI1Q9UJM3 462 aaPredicted RBP12.06□□□□□ -0.48
LSM2-209ENST00000470083 RPS6KL1Q9Y6S9 549 aa12.06□□□□□ -0.48
LSM2-209ENST00000470083 AKAP9Q99996 3911 aa12.06□□□□□ -0.48
LSM2-209ENST00000470083 PDZD2O15018 2839 aa12.06□□□□□ -0.48
LSM2-209ENST00000470083 HAX1O00165 279 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 LETM1O95202 739 aaPredicted RBP12.05□□□□□ -0.48
LSM2-209ENST00000470083 ECEL1O95672 775 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 DLGAP3O95886 979 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 FGF1P05230 155 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 HOXC4P09017 264 aaPredicted RBP12.05□□□□□ -0.48
LSM2-209ENST00000470083 CCNB1P14635 433 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 BMP6P22004 513 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 F8A1P23610 371 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 ACVRL1P37023 503 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 STAT1P42224 750 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 RAD51Q06609 339 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 BIRC2Q13490 618 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 MAP7Q14244 749 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 TSR1Q2NL82 804 aaKnown RBP12.05□□□□□ -0.48
LSM2-209ENST00000470083 ATXN7L2Q5T6C5 722 aaPredicted RBP12.05□□□□□ -0.48
LSM2-209ENST00000470083 TMEM71Q6P5X7 295 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 OLFML1Q6UWY5 402 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 DRC7Q8IY82 874 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 PLA2G15Q8NCC3 412 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 LMO3Q8TAP4 145 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 PRR7Q8TB68 274 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 ZNF606Q8WXB4 792 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 HMCESQ96FZ2 354 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 GDAP1L1Q96MZ0 367 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 NPY6RQ99463 290 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 CTRCQ99895 268 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 SLC29A3Q9BZD2 475 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 ZYG11BQ9C0D3 744 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 FBXO8Q9NRD0 319 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 RRN3Q9NYV6 651 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 OAS3Q9Y6K5 1087 aaKnown RBP12.05□□□□□ -0.48
LSM2-209ENST00000470083 CSMD2Q7Z408 3487 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 LRP4O75096 1905 aa12.05□□□□□ -0.48
LSM2-209ENST00000470083 SHANK1Q9Y566 2161 aa12.04□□□□□ -0.48
LSM2-209ENST00000470083 PRSS38A1L453 326 aa12.04□□□□□ -0.48
LSM2-209ENST00000470083 SRGAP2O75044 1071 aa12.04□□□□□ -0.48
LSM2-209ENST00000470083 FURINP09958 794 aa12.04□□□□□ -0.48
LSM2-209ENST00000470083 KRT5P13647 590 aa12.04□□□□□ -0.48
LSM2-209ENST00000470083 PFKFB1P16118 471 aa12.04□□□□□ -0.48
LSM2-209ENST00000470083 TFE3P19532 575 aaPredicted RBP12.04□□□□□ -0.48
LSM2-209ENST00000470083 XPAP23025 273 aaPredicted RBP12.04□□□□□ -0.48
LSM2-209ENST00000470083 NOP2P46087 812 aaKnown RBP12.04□□□□□ -0.48
LSM2-209ENST00000470083 GPLD1P80108 840 aa12.04□□□□□ -0.48
LSM2-209ENST00000470083 FKBP3Q00688 224 aaKnown RBP12.04□□□□□ -0.48
LSM2-209ENST00000470083 ILF3Q12906 894 aaKnown RBP eCLIP12.04□□□□□ -0.482e-7■■□□□ 14.4
LSM2-209ENST00000470083 RAPGEF1Q13905 1077 aa12.04□□□□□ -0.48
LSM2-209ENST00000470083 ERV3-1Q14264 604 aa12.04□□□□□ -0.48
LSM2-209ENST00000470083 INPP5JQ15735 1006 aaPredicted RBP12.04□□□□□ -0.48
LSM2-209ENST00000470083 NADK2Q4G0N4 442 aa12.04□□□□□ -0.48
LSM2-209ENST00000470083 C11orf57Q6ZUT1 292 aaPredicted RBP12.04□□□□□ -0.48
LSM2-209ENST00000470083 FAM183BPQ6ZVS7 135 aa12.04□□□□□ -0.48
LSM2-209ENST00000470083 SLC26A9Q7LBE3 791 aa12.04□□□□□ -0.48
LSM2-209ENST00000470083 NRROSQ86YC3 692 aa12.04□□□□□ -0.48
LSM2-209ENST00000470083 APLFQ8IW19 511 aaPredicted RBP12.04□□□□□ -0.48
LSM2-209ENST00000470083 ARHGEF19Q8IW93 802 aa12.04□□□□□ -0.48
LSM2-209ENST00000470083 PGAP3Q96FM1 320 aaPredicted RBP12.04□□□□□ -0.48
LSM2-209ENST00000470083 INTS4Q96HW7 963 aaKnown RBP12.04□□□□□ -0.48
LSM2-209ENST00000470083 KREMEN1Q96MU8 473 aa12.04□□□□□ -0.48
LSM2-209ENST00000470083 GSDMCQ9BYG8 508 aa12.04□□□□□ -0.48
LSM2-209ENST00000470083 PCDH12Q9NPG4 1184 aa12.04□□□□□ -0.48
LSM2-209ENST00000470083 TAAR2Q9P1P5 351 aa12.04□□□□□ -0.48
LSM2-209ENST00000470083 MFHAS1Q9Y4C4 1052 aa12.04□□□□□ -0.48
LSM2-209ENST00000470083 HIVEP1P15822 2718 aa12.04□□□□□ -0.48
LSM2-209ENST00000470083 PPM1DO15297 605 aa12.03□□□□□ -0.48
LSM2-209ENST00000470083 THAP12O43422 761 aa12.03□□□□□ -0.48
LSM2-209ENST00000470083 F9P00740 461 aa12.03□□□□□ -0.48
LSM2-209ENST00000470083 PRF1P14222 555 aa12.03□□□□□ -0.48
LSM2-209ENST00000470083 TRIM23P36406 574 aa12.03□□□□□ -0.48
LSM2-209ENST00000470083 LIG3P49916 1009 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms