RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 C6orf52Q5T4I8 152 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 SPRYD7Q5W111 196 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 TMEM207Q6UWW9 146 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 TEX26Q8N6G2 289 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 DDI1Q8WTU0 396 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 SLC39A13Q96H72 371 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 CNBD2Q96M20 576 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 CYP4F12Q9HCS2 524 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 PRDM5Q9NQX1 630 aaPredicted RBP13.72□□□□□ -0.21
BRCA1-209ENST00000470026 ETAA1Q9NY74 926 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 TRAF6Q9Y4K3 522 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 SCN10AQ9Y5Y9 1956 aa13.72□□□□□ -0.21
BRCA1-209ENST00000470026 C7orf72A4D263 438 aa13.71□□□□□ -0.21
BRCA1-209ENST00000470026 B3GAT3O94766 335 aa13.71□□□□□ -0.21
BRCA1-209ENST00000470026 S1PR4O95977 384 aa13.71□□□□□ -0.21
BRCA1-209ENST00000470026 ARSAP15289 507 aa13.71□□□□□ -0.21
BRCA1-209ENST00000470026 RENBPP51606 427 aa13.71□□□□□ -0.21
BRCA1-209ENST00000470026 CCL14Q16627 93 aa13.71□□□□□ -0.21
BRCA1-209ENST00000470026 UGT3A2Q3SY77 523 aa13.71□□□□□ -0.21
BRCA1-209ENST00000470026 C6orf10Q5SRN2 563 aa13.71□□□□□ -0.21
BRCA1-209ENST00000470026 ZNF678Q5SXM1 525 aa13.71□□□□□ -0.21
BRCA1-209ENST00000470026 MSANTD2Q6P1R3 559 aa13.71□□□□□ -0.21
BRCA1-209ENST00000470026 ISCA2Q86U28 154 aa13.71□□□□□ -0.21
BRCA1-209ENST00000470026 RSPH1Q8WYR4 309 aa13.71□□□□□ -0.21
BRCA1-209ENST00000470026 LPGAT1Q92604 370 aa13.71□□□□□ -0.21
BRCA1-209ENST00000470026 DTNBP1Q96EV8 351 aa13.71□□□□□ -0.21
BRCA1-209ENST00000470026 NMUR1Q9HB89 426 aa13.71□□□□□ -0.21
BRCA1-209ENST00000470026 MPP6Q9NZW5 540 aa13.71□□□□□ -0.21
BRCA1-209ENST00000470026 DOCK4Q8N1I0 1966 aa13.71□□□□□ -0.22
BRCA1-209ENST00000470026 PDLIM1O00151 329 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 NRP2O60462 931 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 TYMPP19971 482 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 TCN1P20061 433 aaPredicted RBP13.7□□□□□ -0.22
BRCA1-209ENST00000470026 KCNC1P48547 511 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 ACVR1Q04771 509 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 IKBKEQ14164 716 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 ADRM1Q16186 407 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 SAMD4BQ5PRF9 694 aaKnown RBP13.7□□□□□ -0.22
BRCA1-209ENST00000470026 PIK3R6Q5UE93 754 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 RBM44Q6ZP01 1051 aaKnown RBP13.7□□□□□ -0.22
BRCA1-209ENST00000470026 SERPINB11Q96P15 392 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 PCDHAC1Q9H158 963 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 TLL2Q9Y6L7 1015 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 TDRD15B5MCY1 1934 aaKnown RBP13.7□□□□□ -0.22
BRCA1-209ENST00000470026 PLXNA3P51805 1871 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 KLHL33A6NCF5 533 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 MRASO14807 208 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 GPR182O15218 404 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 FGF4P08620 206 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 HDCP19113 662 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 ATXN3P54252 364 aaPredicted RBP13.7□□□□□ -0.22
BRCA1-209ENST00000470026 CDKN2DP55273 166 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 USP46P62068 366 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 FKBP1BP68106 108 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 PCSK7Q16549 785 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 MYLK3Q32MK0 819 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 UNC50Q53HI1 259 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 OVOS1Q6IE37 1185 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 RPS27LQ71UM5 84 aaKnown RBP13.7□□□□□ -0.22
BRCA1-209ENST00000470026 KDELC2Q7Z4H8 507 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 CARM1Q86X55 608 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 FUNDC1Q8IVP5 155 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 SPNS2Q8IVW8 549 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 GALNT4Q8N4A0 578 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 ROPN1LQ96C74 230 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 SUSD3Q96L08 255 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 GPATCH1Q9BRR8 931 aaKnown RBP13.7□□□□□ -0.22
BRCA1-209ENST00000470026 OSBPL11Q9BXB4 747 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 AGO3Q9H9G7 860 aaKnown RBP13.7□□□□□ -0.22
BRCA1-209ENST00000470026 CCDC167Q9P0B6 97 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 CROTQ9UKG9 612 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 DMTF1Q9Y222 760 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 TLR6Q9Y2C9 796 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 RNF11Q9Y3C5 154 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 MYO16Q9Y6X6 1858 aa13.7□□□□□ -0.22
BRCA1-209ENST00000470026 LOC285095A0A1B0GVY8 99 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 BBIP1A8MTZ0 92 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 FAM155AB1AL88 458 aaPredicted RBP13.69□□□□□ -0.22
BRCA1-209ENST00000470026 KPNA6O60684 536 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 GPC4O75487 556 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 SPATA31D3P0C874 917 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 RHOQP17081 205 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 GPX3P22352 226 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 SUOXP51687 545 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 ARSDP51689 593 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 PLK1P53350 603 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 NR1H2P55055 460 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 TSPY1Q01534 308 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 TUSC3Q13454 348 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 DSC3Q14574 896 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 GDF6Q6KF10 455 aaPredicted RBP13.69□□□□□ -0.22
BRCA1-209ENST00000470026 KLHDC10Q6PID8 442 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 B3GNT6Q6ZMB0 384 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 SPATA31D4Q6ZUB0 917 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 SERINC5Q86VE9 423 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 RNF135Q8IUD6 432 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 THEM5Q8N1Q8 247 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 PEX13Q92968 403 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 EME1Q96AY2 570 aa13.69□□□□□ -0.22
BRCA1-209ENST00000470026 UROC1Q96N76 676 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms