RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 ACVR1Q04771 509 aa19.05■□□□□ 0.64
SMC4-209ENST00000468653 PTPRCAPQ14761 206 aa19.05■□□□□ 0.64
SMC4-209ENST00000468653 GEN1Q17RS7 908 aa19.05■□□□□ 0.64
SMC4-209ENST00000468653 MYLK3Q32MK0 819 aa19.05■□□□□ 0.64
SMC4-209ENST00000468653 PRRC2BQ5JSZ5 2229 aaKnown RBP19.05■□□□□ 0.64
SMC4-209ENST00000468653 TANGO2Q6ICL3 276 aa19.05■□□□□ 0.64
SMC4-209ENST00000468653 KIAA0408Q6ZU52 694 aa19.05■□□□□ 0.64
SMC4-209ENST00000468653 ZNF771Q7L3S4 317 aaPredicted RBP19.05■□□□□ 0.64
SMC4-209ENST00000468653 C2CD4AQ8NCU7 369 aaPredicted RBP19.05■□□□□ 0.64
SMC4-209ENST00000468653 MDGA1Q8NFP4 955 aa19.05■□□□□ 0.64
SMC4-209ENST00000468653 OR13C4Q8NGS5 318 aa19.05■□□□□ 0.64
SMC4-209ENST00000468653 SMIM14Q96QK8 99 aa19.05■□□□□ 0.64
SMC4-209ENST00000468653 MCMBPQ9BTE3 642 aa19.05■□□□□ 0.64
SMC4-209ENST00000468653 C12orf65Q9H3J6 166 aaKnown RBP19.05■□□□□ 0.64
SMC4-209ENST00000468653 HACD3Q9P035 362 aa19.05■□□□□ 0.64
SMC4-209ENST00000468653 HECAQ9UBI9 543 aaPredicted RBP19.05■□□□□ 0.64
SMC4-209ENST00000468653 ERVW-1Q9UQF0 538 aa19.05■□□□□ 0.64
SMC4-209ENST00000468653 ANKRD36A6QL64 1941 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 NDUFAB1O14561 156 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 AURKAO14965 403 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 VIMP08670 466 aaKnown RBP19.04■□□□□ 0.64
SMC4-209ENST00000468653 CISD3P0C7P0 127 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 FCARP24071 287 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 SERPINA4P29622 427 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 NNMTP40261 264 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 GRIA4P48058 902 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 RPL26P61254 145 aaKnown RBP19.04■□□□□ 0.64
SMC4-209ENST00000468653 PDGFRLQ15198 375 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 CARD16Q5EG05 197 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 TMEM215Q68D42 235 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 LMNTD2Q8IXW0 634 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 WFIKKN2Q8TEU8 576 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 E2F7Q96AV8 911 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 MAGEB18Q96M61 343 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 CCT8L2Q96SF2 557 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 CIPCQ9C0C6 399 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 SNX15Q9NRS6 342 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 NLE1Q9NVX2 485 aaPredicted RBP19.04■□□□□ 0.64
SMC4-209ENST00000468653 CLEC1BQ9P126 229 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 RPL26L1Q9UNX3 145 aaKnown RBP19.04■□□□□ 0.64
SMC4-209ENST00000468653 LAMA3Q16787 3333 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 TRAFD1O14545 582 aaPredicted RBP19.04■□□□□ 0.64
SMC4-209ENST00000468653 HTRA2O43464 458 aaPredicted RBP19.04■□□□□ 0.64
SMC4-209ENST00000468653 TULP3O75386 442 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 FAM107AO95990 144 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 LPOP22079 712 aaPredicted RBP19.04■□□□□ 0.64
SMC4-209ENST00000468653 GABRB3P28472 473 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 CD151P48509 253 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 ZNF140P52738 457 aaPredicted RBP19.04■□□□□ 0.64
SMC4-209ENST00000468653 RAD51Q06609 339 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 PDE1CQ14123 709 aaPredicted RBP19.04■□□□□ 0.64
SMC4-209ENST00000468653 GRM3Q14832 879 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 CHRDL2Q6WN34 429 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 MICALCLQ6ZW33 695 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 OR4K2Q8NGD2 314 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 CYB5D2Q8WUJ1 264 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 PIH1D2Q8WWB5 315 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 MYLIPQ8WY64 445 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 SPOCK2Q92563 424 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 ZNF317Q96PQ6 595 aaPredicted RBP19.04■□□□□ 0.64
SMC4-209ENST00000468653 FAM111AQ96PZ2 611 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 TUBGCP5Q96RT8 1024 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 GPR22Q99680 433 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 FAM83CQ9BQN1 747 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 SUDS3Q9H7L9 328 aaPredicted RBP19.04■□□□□ 0.64
SMC4-209ENST00000468653 LMCD1Q9NZU5 365 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 SLC39A10Q9ULF5 831 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 SLC8A2Q9UPR5 921 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 PLLPQ9Y342 182 aa19.04■□□□□ 0.64
SMC4-209ENST00000468653 OR51F1A6NGY5 319 aa19.03■□□□□ 0.64
SMC4-209ENST00000468653 POP4O95707 220 aaKnown RBP19.03■□□□□ 0.64
SMC4-209ENST00000468653 GOT2P00505 430 aaKnown RBP19.03■□□□□ 0.64
SMC4-209ENST00000468653 ATP5BP06576 529 aaKnown RBP19.03■□□□□ 0.64
SMC4-209ENST00000468653 CTPS1P17812 591 aa19.03■□□□□ 0.64
SMC4-209ENST00000468653 CRHR1P34998 444 aa19.03■□□□□ 0.64
SMC4-209ENST00000468653 RECQLP46063 649 aaPredicted RBP19.03■□□□□ 0.64
SMC4-209ENST00000468653 VITQ6UXI7 678 aa19.03■□□□□ 0.64
SMC4-209ENST00000468653 CDHR3Q6ZTQ4 885 aa19.03■□□□□ 0.64
SMC4-209ENST00000468653 CPLX4Q7Z7G2 160 aa19.03■□□□□ 0.64
SMC4-209ENST00000468653 CMC1Q7Z7K0 106 aa19.03■□□□□ 0.64
SMC4-209ENST00000468653 C12orf40Q86WS4 652 aa19.03■□□□□ 0.64
SMC4-209ENST00000468653 YAF2Q8IY57 180 aa19.03■□□□□ 0.64
SMC4-209ENST00000468653 SORCS1Q8WY21 1168 aa19.03■□□□□ 0.64
SMC4-209ENST00000468653 ISL2Q96A47 359 aa19.03■□□□□ 0.64
SMC4-209ENST00000468653 MYADMQ96S97 322 aa19.03■□□□□ 0.64
SMC4-209ENST00000468653 S1PR5Q9H228 398 aa19.03■□□□□ 0.64
SMC4-209ENST00000468653 VPS11Q9H270 941 aa19.03■□□□□ 0.64
SMC4-209ENST00000468653 ECT2Q9H8V3 914 aa19.03■□□□□ 0.64
SMC4-209ENST00000468653 FBXO6Q9NRD1 293 aaPredicted RBP19.03■□□□□ 0.64
SMC4-209ENST00000468653 CCDC162PA2VCL2 907 aa19.02■□□□□ 0.64
SMC4-209ENST00000468653 TCP11X1B4DZS4 312 aa19.02■□□□□ 0.64
SMC4-209ENST00000468653 ASLP04424 464 aa19.02■□□□□ 0.64
SMC4-209ENST00000468653 MPOP05164 745 aa19.02■□□□□ 0.64
SMC4-209ENST00000468653 SAT1P21673 171 aa19.02■□□□□ 0.64
SMC4-209ENST00000468653 CCNHP51946 323 aaPredicted RBP19.02■□□□□ 0.64
SMC4-209ENST00000468653 DPY19L3Q6ZPD9 716 aa19.02■□□□□ 0.64
SMC4-209ENST00000468653 Q6ZVU0 165 aa19.02■□□□□ 0.64
SMC4-209ENST00000468653 CILP2Q8IUL8 1156 aa19.02■□□□□ 0.64
SMC4-209ENST00000468653 CDKN2AIPNLQ96HQ2 116 aa19.02■□□□□ 0.64
SMC4-209ENST00000468653 CABS1Q96KC9 395 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms