RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 TMEM109Q9BVC6 243 aa6.06□□□□□ -1.44
CHMP3-206ENST00000466032 TDRD1Q9BXT4 1180 aaKnown RBP6.06□□□□□ -1.44
CHMP3-206ENST00000466032 CIPCQ9C0C6 399 aa6.06□□□□□ -1.44
CHMP3-206ENST00000466032 CDH19Q9H159 772 aa6.06□□□□□ -1.44
CHMP3-206ENST00000466032 MAGEE1Q9HCI5 957 aa6.06□□□□□ -1.44
CHMP3-206ENST00000466032 SAYSD1Q9NPB0 183 aa6.06□□□□□ -1.44
CHMP3-206ENST00000466032 THEGQ9P2T0 379 aa6.06□□□□□ -1.44
CHMP3-206ENST00000466032 THAP10Q9P2Z0 257 aaPredicted RBP6.06□□□□□ -1.44
CHMP3-206ENST00000466032 DKK3Q9UBP4 350 aa6.06□□□□□ -1.44
CHMP3-206ENST00000466032 INTS6Q9UL03 887 aaKnown RBP6.06□□□□□ -1.44
CHMP3-206ENST00000466032 PHTF1Q9UMS5 762 aa6.06□□□□□ -1.44
CHMP3-206ENST00000466032 PPIL1Q9Y3C6 166 aa6.06□□□□□ -1.44
CHMP3-206ENST00000466032 TEX264Q9Y6I9 313 aa6.06□□□□□ -1.44
CHMP3-206ENST00000466032 IKBKGQ9Y6K9 419 aa6.06□□□□□ -1.44
CHMP3-206ENST00000466032 KIF26AQ9ULI4 1882 aaPredicted RBP6.06□□□□□ -1.44
CHMP3-206ENST00000466032 DOCK8Q8NF50 2099 aa6.06□□□□□ -1.44
CHMP3-206ENST00000466032 DOCK6Q96HP0 2047 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 RGSL1A5PLK6 1076 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 ANKRD66B4E2M5 251 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 SPECC1L-ADORA2AF8WAN1 911 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 TP73O15350 636 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 DYRK3O43781 588 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 SNAP91O60641 907 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 ATG13O75143 517 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 PMPCBO75439 489 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 TMEM63AO94886 807 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 MYZAPP0CAP1 466 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 ARSAP15289 507 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 ZNF30P17039 623 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 CNTFP26441 200 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 CTHP32929 405 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 OPRD1P41143 372 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 POLD2P49005 469 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 ZBTB16Q05516 673 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 IFFO1Q0D2I5 559 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 ELP6Q0PNE2 266 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 ENPP2Q13822 863 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 LRRC32Q14392 662 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 CASP8Q14790 479 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 STARD3Q14849 445 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 CCDC85BQ15834 202 aaPredicted RBP6.05□□□□□ -1.44
CHMP3-206ENST00000466032 UGP2Q16851 508 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 BBS9Q3SYG4 887 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 FNDC3BQ53EP0 1204 aaKnown RBP6.05□□□□□ -1.44
CHMP3-206ENST00000466032 TMEM196Q5HYL7 178 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 PDPK2PQ6A1A2 396 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 TRIM68Q6AZZ1 485 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 CASC4Q6P4E1 433 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 KDELC1Q6UW63 502 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 SERPINA13PQ6UXR4 307 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 LEKR1Q6ZMV7 388 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 C3orf62Q6ZUJ4 267 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 USP45Q70EL2 814 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 TAOK1Q7L7X3 1001 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 PRPF39Q86UA1 669 aaKnown RBP6.05□□□□□ -1.44
CHMP3-206ENST00000466032 TMEM135Q86UB9 458 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 CAND1Q86VP6 1230 aaKnown RBP6.05□□□□□ -1.44
CHMP3-206ENST00000466032 CCDC25Q86WR0 208 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 SPATS2Q86XZ4 545 aaKnown RBP6.05□□□□□ -1.44
CHMP3-206ENST00000466032 PAF1Q8N7H5 531 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 NAT16Q8N8M0 369 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 IPMKQ8NFU5 416 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 MAFAQ8NHW3 353 aaPredicted RBP6.05□□□□□ -1.44
CHMP3-206ENST00000466032 GSDMBQ8TAX9 411 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 DTX3LQ8TDB6 740 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 STYXQ8WUJ0 223 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 UBLCP1Q8WVY7 318 aaPredicted RBP6.05□□□□□ -1.44
CHMP3-206ENST00000466032 OR8D1Q8WZ84 308 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 RMDN1Q96DB5 314 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 ASIC4Q96FT7 647 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 OXNAD1Q96HP4 312 aaPredicted RBP6.05□□□□□ -1.44
CHMP3-206ENST00000466032 SGSM3Q96HU1 749 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 SIGLEC10Q96LC7 697 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 LYSMD1Q96S90 227 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 TTC1Q99614 292 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 PAIP2Q9BPZ3 127 aaKnown RBP6.05□□□□□ -1.44
CHMP3-206ENST00000466032 MLPHQ9BV36 600 aaPredicted RBP6.05□□□□□ -1.44
CHMP3-206ENST00000466032 KIFC1Q9BW19 673 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 TXLNGYQ9BZA5 131 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 OSBPL6Q9BZF3 934 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 PLA2G2FQ9BZM2 168 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 CDC42EP4Q9H3Q1 356 aaKnown RBP6.05□□□□□ -1.44
CHMP3-206ENST00000466032 SUV39H2Q9H5I1 410 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 C10orf88Q9H8K7 445 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 SLC24A3Q9HC58 644 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 DYRK4Q9NR20 520 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 GTSE1Q9NYZ3 720 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 HECAQ9UBI9 543 aaPredicted RBP6.05□□□□□ -1.44
CHMP3-206ENST00000466032 LHX3Q9UBR4 397 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 WNT16Q9UBV4 365 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 LIMD1Q9UGP4 676 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 ZC3H7BQ9UGR2 993 aaKnown RBP6.05□□□□□ -1.44
CHMP3-206ENST00000466032 IL36AQ9UHA7 158 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 SLC24A2Q9UI40 661 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 SUFUQ9UMX1 484 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 SOX13Q9UN79 622 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 DUSP12Q9UNI6 340 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 SORCS3Q9UPU3 1222 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 RAI2Q9Y5P3 530 aa6.05□□□□□ -1.44
CHMP3-206ENST00000466032 MAD1L1Q9Y6D9 718 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms