RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 NXPE2Q96DL1 559 aa14.01□□□□□ -0.17
HDAC6-215ENST00000465457 SLC39A13Q96H72 371 aa14.01□□□□□ -0.17
HDAC6-215ENST00000465457 C10orf88Q9H8K7 445 aa14.01□□□□□ -0.17
HDAC6-215ENST00000465457 NMUR1Q9HB89 426 aa14.01□□□□□ -0.17
HDAC6-215ENST00000465457 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.01□□□□□ -0.17
HDAC6-215ENST00000465457 SLC24A2Q9UI40 661 aa14.01□□□□□ -0.17
HDAC6-215ENST00000465457 PCDHGB2Q9Y5G2 931 aa14.01□□□□□ -0.17
HDAC6-215ENST00000465457 ERI2A8K979 691 aaKnown RBP14□□□□□ -0.17
HDAC6-215ENST00000465457 METTL12A8MUP2 240 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 WASH4PA8MWX3 477 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 FAM72CH0Y354 149 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 AP3B1O00203 1094 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 TNFSF14O43557 240 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 PAGE1O75459 146 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 TYRP14679 529 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 PPP2R2AP63151 447 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 AP1B1Q10567 949 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 PARP6Q2NL67 630 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 TNFAIP8L3Q5GJ75 292 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 ANKRD20A2Q5SQ80 823 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 FAM72AQ5TYM5 149 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 ANKRD20A1Q5TYW2 823 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 ANKRD20A3Q5VUR7 823 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 ANKRD22Q5VYY1 191 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 NUGGCQ68CJ6 796 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 FAM72DQ6L9T8 149 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 KLHDC10Q6PID8 442 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 LRRC31Q6UY01 552 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 FAM124AQ86V42 546 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 FAM72BQ86X60 149 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 LURAP1LQ8IV03 231 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 CCNYQ8ND76 341 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 SNX19Q92543 992 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 OTUB2Q96DC9 234 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 BTN2A3PQ96KV6 586 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 C9orf72Q96LT7 481 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 BBS2Q9BXC9 721 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 CAPS2Q9BXY5 557 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 VPS37BQ9H9H4 285 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 ANLNQ9NQW6 1124 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 TMPRSS4Q9NRS4 437 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 PLK2Q9NYY3 685 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 PPARGC1AQ9UBK2 798 aaKnown RBP14□□□□□ -0.17
HDAC6-215ENST00000465457 NOVA2Q9UNW9 492 aaKnown RBP14□□□□□ -0.17
HDAC6-215ENST00000465457 HBS1LQ9Y450 684 aaKnown RBP14□□□□□ -0.17
HDAC6-215ENST00000465457 ACTL7BQ9Y614 415 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 STON1Q9Y6Q2 735 aa14□□□□□ -0.17
HDAC6-215ENST00000465457 ARID1BQ8NFD5 2236 aaPredicted RBP14□□□□□ -0.17
HDAC6-215ENST00000465457 EXOC1LA0A1B0GW35 172 aa13.99□□□□□ -0.17
HDAC6-215ENST00000465457 TLDC2A0PJX2 215 aa13.99□□□□□ -0.17
HDAC6-215ENST00000465457 H0Y8X5 98 aa13.99□□□□□ -0.17
HDAC6-215ENST00000465457 I6L893 689 aaPredicted RBP13.99□□□□□ -0.17
HDAC6-215ENST00000465457 ZBTB24O43167 697 aaPredicted RBP13.99□□□□□ -0.17
HDAC6-215ENST00000465457 APRTP07741 180 aa13.99□□□□□ -0.17
HDAC6-215ENST00000465457 VAV1P15498 845 aa13.99□□□□□ -0.17
HDAC6-215ENST00000465457 GARSP41250 739 aaKnown RBP13.99□□□□□ -0.17
HDAC6-215ENST00000465457 IL12RB1P42701 662 aa13.99□□□□□ -0.17
HDAC6-215ENST00000465457 LMAN1P49257 510 aa13.99□□□□□ -0.17
HDAC6-215ENST00000465457 TUBP50607 506 aa13.99□□□□□ -0.17
HDAC6-215ENST00000465457 MAGOHP61326 146 aaKnown RBP13.99□□□□□ -0.17
HDAC6-215ENST00000465457 AUHQ13825 339 aaKnown RBP13.99□□□□□ -0.17
HDAC6-215ENST00000465457 SNX30Q5VWJ9 437 aa13.99□□□□□ -0.17
HDAC6-215ENST00000465457 SDE2Q6IQ49 451 aa13.99□□□□□ -0.17
HDAC6-215ENST00000465457 TIGD7Q6NT04 549 aaPredicted RBP13.99□□□□□ -0.17
HDAC6-215ENST00000465457 CCNJLQ8IV13 435 aa13.99□□□□□ -0.17
HDAC6-215ENST00000465457 PALM2Q8IXS6 379 aa13.99□□□□□ -0.17
HDAC6-215ENST00000465457 SH2D3CQ8N5H7 860 aa13.99□□□□□ -0.17
HDAC6-215ENST00000465457 CCDC110Q8TBZ0 833 aa13.99□□□□□ -0.17
HDAC6-215ENST00000465457 EPS8L3Q8TE67 593 aaKnown RBP13.99□□□□□ -0.17
HDAC6-215ENST00000465457 FATE1Q969F0 183 aa13.99□□□□□ -0.17
HDAC6-215ENST00000465457 FCRL2Q96LA5 508 aaPredicted RBP13.99□□□□□ -0.17
HDAC6-215ENST00000465457 TSGA13Q96PP4 275 aa13.99□□□□□ -0.17
HDAC6-215ENST00000465457 LGMNQ99538 433 aa13.99□□□□□ -0.17
HDAC6-215ENST00000465457 NAT9Q9BTE0 207 aa13.99□□□□□ -0.17
HDAC6-215ENST00000465457 C6orf106Q9H6K1 298 aaPredicted RBP13.99□□□□□ -0.17
HDAC6-215ENST00000465457 ETNK1Q9HBU6 452 aa13.99□□□□□ -0.17
HDAC6-215ENST00000465457 LRRC4CQ9HCJ2 640 aa13.99□□□□□ -0.17
HDAC6-215ENST00000465457 ITM2CQ9NQX7 267 aa13.99□□□□□ -0.17
HDAC6-215ENST00000465457 MARCH2Q9P0N8 246 aa13.99□□□□□ -0.17
HDAC6-215ENST00000465457 SENP1Q9P0U3 644 aa13.99□□□□□ -0.17
HDAC6-215ENST00000465457 SFMBT1Q9UHJ3 866 aa13.99□□□□□ -0.17
HDAC6-215ENST00000465457 PIEZO2Q9H5I5 2752 aa13.98□□□□□ -0.17
HDAC6-215ENST00000465457 GOLGA8MH3BSY2 632 aa13.98□□□□□ -0.17
HDAC6-215ENST00000465457 PSMD3O43242 534 aa13.98□□□□□ -0.17
HDAC6-215ENST00000465457 MSI1O43347 362 aaKnown RBP13.98□□□□□ -0.17
HDAC6-215ENST00000465457 IGLV3-27P01718 113 aa13.98□□□□□ -0.17
HDAC6-215ENST00000465457 CISD3P0C7P0 127 aa13.98□□□□□ -0.17
HDAC6-215ENST00000465457 CCNCP24863 283 aa13.98□□□□□ -0.17
HDAC6-215ENST00000465457 STX2P32856 288 aa13.98□□□□□ -0.17
HDAC6-215ENST00000465457 GRK6P43250 576 aa13.98□□□□□ -0.17
HDAC6-215ENST00000465457 GYS2P54840 703 aa13.98□□□□□ -0.17
HDAC6-215ENST00000465457 DNAJC3Q13217 504 aa13.98□□□□□ -0.17
HDAC6-215ENST00000465457 BBS9Q3SYG4 887 aa13.98□□□□□ -0.17
HDAC6-215ENST00000465457 C10orf120Q5SQS8 335 aa13.98□□□□□ -0.17
HDAC6-215ENST00000465457 HECTD3Q5T447 861 aa13.98□□□□□ -0.17
HDAC6-215ENST00000465457 RWDD4Q6NW29 188 aaKnown RBP13.98□□□□□ -0.17
HDAC6-215ENST00000465457 IL27RAQ6UWB1 636 aa13.98□□□□□ -0.17
HDAC6-215ENST00000465457 LEKR1Q6ZMV7 388 aa13.98□□□□□ -0.17
HDAC6-215ENST00000465457 GPR155Q7Z3F1 870 aa13.98□□□□□ -0.17
HDAC6-215ENST00000465457 CCDC13Q8IYE1 715 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms