RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 SH3BP5O60239 455 aa17.13■□□□□ 0.33
VPS52-215ENST00000464425 MAGEC1O60732 1142 aa17.13■□□□□ 0.33
VPS52-215ENST00000464425 SOCS5O75159 536 aa17.13■□□□□ 0.33
VPS52-215ENST00000464425 KCNK5O95279 499 aa17.13■□□□□ 0.33
VPS52-215ENST00000464425 MMP12P39900 470 aa17.13■□□□□ 0.33
VPS52-215ENST00000464425 LIG3P49916 1009 aa17.13■□□□□ 0.33
VPS52-215ENST00000464425 NOVA1P51513 510 aaKnown RBP17.13■□□□□ 0.33
VPS52-215ENST00000464425 IFI35P80217 286 aaPredicted RBP17.13■□□□□ 0.33
VPS52-215ENST00000464425 NIPAL4Q0D2K0 466 aa17.13■□□□□ 0.33
VPS52-215ENST00000464425 OVGP1Q12889 678 aa17.13■□□□□ 0.33
VPS52-215ENST00000464425 SLC14A1Q13336 389 aa17.13■□□□□ 0.33
VPS52-215ENST00000464425 IHHQ14623 411 aa17.13■□□□□ 0.33
VPS52-215ENST00000464425 SEL1L2Q5TEA6 688 aa17.13■□□□□ 0.33
VPS52-215ENST00000464425 PSAPL1Q6NUJ1 521 aa17.13■□□□□ 0.33
VPS52-215ENST00000464425 AADACL2Q6P093 401 aa17.13■□□□□ 0.33
VPS52-215ENST00000464425 KDM7AQ6ZMT4 941 aa17.13■□□□□ 0.33
VPS52-215ENST00000464425 Q6ZSR6 202 aa17.13■□□□□ 0.33
VPS52-215ENST00000464425 PTAR1Q7Z6K3 402 aaPredicted RBP17.13■□□□□ 0.33
VPS52-215ENST00000464425 OR13H1Q8NG92 308 aa17.13■□□□□ 0.33
VPS52-215ENST00000464425 SETD7Q8WTS6 366 aaKnown RBP17.13■□□□□ 0.33
VPS52-215ENST00000464425 ASB12Q8WXK4 309 aa17.13■□□□□ 0.33
VPS52-215ENST00000464425 P3H4Q92791 437 aa17.13■□□□□ 0.33
VPS52-215ENST00000464425 PBKQ96KB5 322 aa17.13■□□□□ 0.33
VPS52-215ENST00000464425 LENG8Q96PV6 779 aaPredicted RBP17.13■□□□□ 0.33
VPS52-215ENST00000464425 ELF4Q99607 663 aaPredicted RBP17.13■□□□□ 0.33
VPS52-215ENST00000464425 KLF6Q99612 283 aaPredicted RBP17.13■□□□□ 0.33
VPS52-215ENST00000464425 BRD8Q9H0E9 1235 aa17.13■□□□□ 0.33
VPS52-215ENST00000464425 HAUS2Q9NVX0 235 aa17.13■□□□□ 0.33
VPS52-215ENST00000464425 APOC4-APOC2K7ER74 178 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 FPGTO14772 594 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 LZTS3O60299 673 aaPredicted RBP17.12■□□□□ 0.33
VPS52-215ENST00000464425 PGLSO95336 258 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 CPP00450 1065 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 APOC2P02655 101 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 ZNF883P0CG24 379 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 C6P13671 934 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 CSRP1P21291 193 aaKnown RBP17.12■□□□□ 0.33
VPS52-215ENST00000464425 CES1P23141 567 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 CCT8P50990 548 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 RALGDSQ12967 914 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 KLF1Q13351 362 aaPredicted RBP17.12■□□□□ 0.33
VPS52-215ENST00000464425 PTPRRQ15256 657 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 ARMC12Q5T9G4 340 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 CCDC181Q5TID7 509 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 ERMP1Q7Z2K6 904 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 ABI3BPQ7Z7G0 1075 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 PIP4P1Q86T03 277 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 ZC3H18Q86VM9 953 aaKnown RBP17.12■□□□□ 0.33
VPS52-215ENST00000464425 CNTD1Q8N815 330 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 ARRDC2Q8TBH0 407 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 TFB1MQ8WVM0 346 aaKnown RBP17.12■□□□□ 0.33
VPS52-215ENST00000464425 CENPTQ96BT3 561 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 AGAP3Q96P47 875 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 WDR24Q96S15 920 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 IL12RB2Q99665 862 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 HERPUD2Q9BSE4 406 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 SLC32A1Q9H598 525 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 MBNL1Q9NR56 388 aaKnown RBP17.12■□□□□ 0.33
VPS52-215ENST00000464425 AMACRQ9UHK6 382 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 PHTF1Q9UMS5 762 aa17.12■□□□□ 0.33
VPS52-215ENST00000464425 ANKRD36A6QL64 1941 aa17.11■□□□□ 0.33
VPS52-215ENST00000464425 A0A1B0GTQ1 180 aa17.11■□□□□ 0.33
VPS52-215ENST00000464425 A0A1W2PQ67 120 aa17.11■□□□□ 0.33
VPS52-215ENST00000464425 A6NNZ2 444 aa17.11■□□□□ 0.33
VPS52-215ENST00000464425 CES2O00748 559 aa17.11■□□□□ 0.33
VPS52-215ENST00000464425 DFNA5O60443 496 aa17.11■□□□□ 0.33
VPS52-215ENST00000464425 ATP1A1P05023 1023 aaKnown RBP17.11■□□□□ 0.33
VPS52-215ENST00000464425 PDHA1P08559 390 aa17.11■□□□□ 0.33
VPS52-215ENST00000464425 CTPS1P17812 591 aa17.11■□□□□ 0.33
VPS52-215ENST00000464425 ETF1P62495 437 aaKnown RBP17.11■□□□□ 0.33
VPS52-215ENST00000464425 PRKD1Q15139 912 aaPredicted RBP17.11■□□□□ 0.33
VPS52-215ENST00000464425 SHBQ15464 509 aa17.11■□□□□ 0.33
VPS52-215ENST00000464425 ALG1LQ6GMV1 187 aa17.11■□□□□ 0.33
VPS52-215ENST00000464425 NYAP1Q6ZVC0 841 aa17.11■□□□□ 0.33
VPS52-215ENST00000464425 DPPA4Q7L190 304 aa17.11■□□□□ 0.33
VPS52-215ENST00000464425 GATAD2AQ86YP4 633 aa17.11■□□□□ 0.33
VPS52-215ENST00000464425 NAXDQ8IW45 347 aa17.11■□□□□ 0.33
VPS52-215ENST00000464425 SLC22A18ASQ8N1D0 253 aa17.11■□□□□ 0.33
VPS52-215ENST00000464425 TTC13Q8NBP0 860 aa17.11■□□□□ 0.33
VPS52-215ENST00000464425 C1QTNF7Q9BXJ2 289 aa17.11■□□□□ 0.33
VPS52-215ENST00000464425 ERVMER34-1Q9H9K5 563 aa17.11■□□□□ 0.33
VPS52-215ENST00000464425 B4GALT6Q9UBX8 382 aa17.11■□□□□ 0.33
VPS52-215ENST00000464425 SNX12Q9UMY4 172 aa17.11■□□□□ 0.33
VPS52-215ENST00000464425 CHKBQ9Y259 395 aa17.11■□□□□ 0.33
VPS52-215ENST00000464425 TMEM131Q92545 1883 aa17.11■□□□□ 0.33
VPS52-215ENST00000464425 CTAGE9A4FU28 777 aa17.1■□□□□ 0.33
VPS52-215ENST00000464425 TUBB4AP04350 444 aa17.1■□□□□ 0.33
VPS52-215ENST00000464425 ELFN1P0C7U0 828 aa17.1■□□□□ 0.33
VPS52-215ENST00000464425 CEACAM1P13688 526 aa17.1■□□□□ 0.33
VPS52-215ENST00000464425 CD86P42081 329 aa17.1■□□□□ 0.33
VPS52-215ENST00000464425 ARRB1P49407 418 aaPredicted RBP17.1■□□□□ 0.33
VPS52-215ENST00000464425 XRCC4Q13426 336 aa17.1■□□□□ 0.33
VPS52-215ENST00000464425 SUZ12Q15022 739 aaKnown RBP17.1■□□□□ 0.33
VPS52-215ENST00000464425 LRRC14Q15048 493 aa17.1■□□□□ 0.33
VPS52-215ENST00000464425 WSCD2Q2TBF2 565 aa17.1■□□□□ 0.33
VPS52-215ENST00000464425 PAPD7Q5XG87 772 aaKnown RBP17.1■□□□□ 0.33
VPS52-215ENST00000464425 LIPIQ6XZB0 460 aa17.1■□□□□ 0.33
VPS52-215ENST00000464425 KYAT3Q6YP21 454 aaKnown RBP17.1■□□□□ 0.33
VPS52-215ENST00000464425 SLC13A5Q86YT5 568 aaPredicted RBP17.1■□□□□ 0.33
VPS52-215ENST00000464425 TP53I13Q8NBR0 393 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms