RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 B4GALNT1Q00973 533 aa13.29□□□□□ -0.28
SRRT-206ENST00000460194 RAD51Q06609 339 aa13.29□□□□□ -0.28
SRRT-206ENST00000460194 NFATC3Q12968 1075 aa13.29□□□□□ -0.28
SRRT-206ENST00000460194 PARP15Q460N3 678 aa13.29□□□□□ -0.28
SRRT-206ENST00000460194 TCP11X2Q5H9J9 407 aa13.29□□□□□ -0.28
SRRT-206ENST00000460194 PPP1R15BQ5SWA1 713 aa13.29□□□□□ -0.28
SRRT-206ENST00000460194 RD3Q7Z3Z2 195 aa13.29□□□□□ -0.28
SRRT-206ENST00000460194 DNAAF5Q86Y56 855 aa13.29□□□□□ -0.28
SRRT-206ENST00000460194 PHF13Q86YI8 300 aaPredicted RBP13.29□□□□□ -0.28
SRRT-206ENST00000460194 CAMK1DQ8IU85 385 aa13.29□□□□□ -0.28
SRRT-206ENST00000460194 CCNJLQ8IV13 435 aa13.29□□□□□ -0.28
SRRT-206ENST00000460194 CCL4L1Q8NHW4 92 aa13.29□□□□□ -0.28
SRRT-206ENST00000460194 HTR3CQ8WXA8 447 aa13.29□□□□□ -0.28
SRRT-206ENST00000460194 TMEM159Q96B96 161 aa13.29□□□□□ -0.28
SRRT-206ENST00000460194 WDR92Q96MX6 357 aa13.29□□□□□ -0.28
SRRT-206ENST00000460194 ZNF641Q96N77 438 aaPredicted RBP13.29□□□□□ -0.28
SRRT-206ENST00000460194 LGR4Q9BXB1 951 aa13.29□□□□□ -0.28
SRRT-206ENST00000460194 B3GNT4Q9C0J1 378 aa13.29□□□□□ -0.28
SRRT-206ENST00000460194 STRADBQ9C0K7 418 aa13.29□□□□□ -0.28
SRRT-206ENST00000460194 SYNDIG1Q9H7V2 258 aa13.29□□□□□ -0.28
SRRT-206ENST00000460194 FGF22Q9HCT0 170 aa13.29□□□□□ -0.28
SRRT-206ENST00000460194 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.29□□□□□ -0.28
SRRT-206ENST00000460194 KLQ9UEF7 1012 aa13.29□□□□□ -0.28
SRRT-206ENST00000460194 PISDQ9UG56 409 aa13.29□□□□□ -0.28
SRRT-206ENST00000460194 DAAM1Q9Y4D1 1078 aa13.29□□□□□ -0.28
SRRT-206ENST00000460194 PCDHGA4Q9Y5G9 962 aa13.29□□□□□ -0.28
SRRT-206ENST00000460194 RNF215Q9Y6U7 377 aa13.29□□□□□ -0.28
SRRT-206ENST00000460194 SIGLEC16A6NMB1 481 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 CCP110O43303 1012 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 B4GAT1O43505 415 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 TNFP01375 233 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 FUCA1P04066 466 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 PRKCGP05129 697 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 HTR1BP28222 390 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 SOX5P35711 763 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 CSNK1DP48730 415 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 UBE2HP62256 183 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 NFKB2Q00653 900 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 SRSF1Q07955 248 aaKnown RBP eCLIP13.28□□□□□ -0.28
SRRT-206ENST00000460194 GRM3Q14832 879 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 NR1D2Q14995 579 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 AFMIDQ63HM1 303 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 BRAT1Q6PJG6 821 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 LIPIQ6XZB0 460 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 ZNF574Q6ZN55 896 aaPredicted RBP13.28□□□□□ -0.28
SRRT-206ENST00000460194 USP53Q70EK8 1073 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 ZFAND4Q86XD8 727 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 C3orf20Q8ND61 904 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 OR56A4Q8NGH8 313 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 TUBGCP5Q96RT8 1024 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 TMEM168Q9H0V1 697 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 SEMA6CQ9H3T2 930 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 MRPL40Q9NQ50 206 aaKnown RBP13.28□□□□□ -0.28
SRRT-206ENST00000460194 DOLKQ9UPQ8 538 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 ATP8A1Q9Y2Q0 1164 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 ST14Q9Y5Y6 855 aa13.28□□□□□ -0.28
SRRT-206ENST00000460194 A0A1W2PQC6 194 aa13.27□□□□□ -0.29
SRRT-206ENST00000460194 TRAFD1O14545 582 aaPredicted RBP13.27□□□□□ -0.29
SRRT-206ENST00000460194 TNFRSF10CO14798 259 aa13.27□□□□□ -0.29
SRRT-206ENST00000460194 NUDT21O43809 227 aaKnown RBP13.27□□□□□ -0.29
SRRT-206ENST00000460194 PRAMEF11O60813 436 aa13.27□□□□□ -0.29
SRRT-206ENST00000460194 RECQL5O94762 991 aaPredicted RBP13.27□□□□□ -0.29
SRRT-206ENST00000460194 FAM87AP0C7U9 286 aa13.27□□□□□ -0.29
SRRT-206ENST00000460194 GPD1P21695 349 aa13.27□□□□□ -0.29
SRRT-206ENST00000460194 ZNF143P52747 638 aaPredicted RBP13.27□□□□□ -0.29
SRRT-206ENST00000460194 RPL7AP62424 266 aaKnown RBP13.27□□□□□ -0.29
SRRT-206ENST00000460194 BECN1Q14457 450 aa13.27□□□□□ -0.29
SRRT-206ENST00000460194 C16orf72Q14CZ0 275 aa13.27□□□□□ -0.29
SRRT-206ENST00000460194 TBR1Q16650 682 aa13.27□□□□□ -0.29
SRRT-206ENST00000460194 C14orf28Q4W4Y0 310 aa13.27□□□□□ -0.29
SRRT-206ENST00000460194 TRIM72Q6ZMU5 477 aa13.27□□□□□ -0.29
SRRT-206ENST00000460194 MON1BQ7L1V2 547 aa13.27□□□□□ -0.29
SRRT-206ENST00000460194 PRICKLE2Q7Z3G6 844 aa13.27□□□□□ -0.29
SRRT-206ENST00000460194 ZNF438Q7Z4V0 828 aa13.27□□□□□ -0.29
SRRT-206ENST00000460194 NRROSQ86YC3 692 aa13.27□□□□□ -0.29
SRRT-206ENST00000460194 CBARPQ8N350 705 aaPredicted RBP13.27□□□□□ -0.29
SRRT-206ENST00000460194 Q8N9G6 341 aaPredicted RBP13.27□□□□□ -0.29
SRRT-206ENST00000460194 SPOCK2Q92563 424 aa13.27□□□□□ -0.29
SRRT-206ENST00000460194 USP7Q93009 1102 aa13.27□□□□□ -0.29
SRRT-206ENST00000460194 FUCA2Q9BTY2 467 aa13.27□□□□□ -0.29
SRRT-206ENST00000460194 TRIM4Q9C037 500 aa13.27□□□□□ -0.29
SRRT-206ENST00000460194 LRIT1Q9P2V4 623 aa13.27□□□□□ -0.29
SRRT-206ENST00000460194 SIK3Q9Y2K2 1263 aa13.27□□□□□ -0.29
SRRT-206ENST00000460194 PCCBP05166 539 aa13.26□□□□□ -0.29
SRRT-206ENST00000460194 JMJD7P0C870 316 aa13.26□□□□□ -0.29
SRRT-206ENST00000460194 EEF1GP26641 437 aaKnown RBP13.26□□□□□ -0.29
SRRT-206ENST00000460194 AIF1P55008 147 aa13.26□□□□□ -0.29
SRRT-206ENST00000460194 POLR2FP61218 127 aaKnown RBP13.26□□□□□ -0.29
SRRT-206ENST00000460194 CYP4F2P78329 520 aa13.26□□□□□ -0.29
SRRT-206ENST00000460194 OGDHQ02218 1023 aa13.26□□□□□ -0.29
SRRT-206ENST00000460194 CLCA4Q14CN2 919 aa13.26□□□□□ -0.29
SRRT-206ENST00000460194 TPD52L1Q16890 204 aaPredicted RBP13.26□□□□□ -0.29
SRRT-206ENST00000460194 CLEC16AQ2KHT3 1053 aa13.26□□□□□ -0.29
SRRT-206ENST00000460194 CDKAL1Q5VV42 579 aa13.26□□□□□ -0.29
SRRT-206ENST00000460194 SPECC1LQ69YQ0 1117 aa13.26□□□□□ -0.29
SRRT-206ENST00000460194 VASH2Q86V25 355 aa13.26□□□□□ -0.29
SRRT-206ENST00000460194 JAMLQ86YT9 394 aa13.26□□□□□ -0.29
SRRT-206ENST00000460194 ARHGAP12Q8IWW6 846 aa13.26□□□□□ -0.29
SRRT-206ENST00000460194 ARFGAP1Q8N6T3 406 aa13.26□□□□□ -0.29
SRRT-206ENST00000460194 TSEN2Q8NCE0 465 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms