RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 EMC1Q8N766 993 aa23.37■■□□□ 1.33
PTPRA-208ENST00000455631 PLA2G15Q8NCC3 412 aa23.37■■□□□ 1.33
PTPRA-208ENST00000455631 CCL4L1Q8NHW4 92 aa23.37■■□□□ 1.33
PTPRA-208ENST00000455631 C9orf43Q8TAL5 461 aaPredicted RBP23.37■■□□□ 1.33
PTPRA-208ENST00000455631 KIAA1524Q8TCG1 905 aa23.37■■□□□ 1.33
PTPRA-208ENST00000455631 CASKIN2Q8WXE0 1202 aa23.37■■□□□ 1.33
PTPRA-208ENST00000455631 TBC1D31Q96DN5 1066 aa23.37■■□□□ 1.33
PTPRA-208ENST00000455631 CCDC74BQ96LY2 380 aa23.37■■□□□ 1.33
PTPRA-208ENST00000455631 RETREG1Q9H6L5 497 aa23.37■■□□□ 1.33
PTPRA-208ENST00000455631 MOSPD1Q9UJG1 213 aa23.37■■□□□ 1.33
PTPRA-208ENST00000455631 NEU3Q9UQ49 428 aa23.37■■□□□ 1.33
PTPRA-208ENST00000455631 DAAM1Q9Y4D1 1078 aa23.37■■□□□ 1.33
PTPRA-208ENST00000455631 ARHGEF17Q96PE2 2063 aaPredicted RBP23.36■■□□□ 1.33
PTPRA-208ENST00000455631 FAM72CH0Y354 149 aa23.36■■□□□ 1.33
PTPRA-208ENST00000455631 B4GAT1O43505 415 aa23.36■■□□□ 1.33
PTPRA-208ENST00000455631 FGF3P11487 239 aaPredicted RBP23.36■■□□□ 1.33
PTPRA-208ENST00000455631 ALDH4A1P30038 563 aa23.36■■□□□ 1.33
PTPRA-208ENST00000455631 ADRA1BP35368 520 aa23.36■■□□□ 1.33
PTPRA-208ENST00000455631 UGT1A3P35503 534 aa23.36■■□□□ 1.33
PTPRA-208ENST00000455631 KIAA1024LP59773 190 aa23.36■■□□□ 1.33
PTPRA-208ENST00000455631 SERINC3Q13530 473 aa23.36■■□□□ 1.33
PTPRA-208ENST00000455631 CFAP58Q5T655 872 aa23.36■■□□□ 1.33
PTPRA-208ENST00000455631 FAM72AQ5TYM5 149 aa23.36■■□□□ 1.33
PTPRA-208ENST00000455631 FAM72DQ6L9T8 149 aa23.36■■□□□ 1.33
PTPRA-208ENST00000455631 FAM72BQ86X60 149 aa23.36■■□□□ 1.33
PTPRA-208ENST00000455631 FUBP1Q96AE4 644 aaKnown RBP23.36■■□□□ 1.33
PTPRA-208ENST00000455631 CATSPER2Q96P56 530 aa23.36■■□□□ 1.33
PTPRA-208ENST00000455631 SIX2Q9NPC8 291 aa23.36■■□□□ 1.33
PTPRA-208ENST00000455631 METTL5Q9NRN9 209 aaKnown RBP23.36■■□□□ 1.33
PTPRA-208ENST00000455631 PCDHGA3Q9Y5H0 932 aa23.36■■□□□ 1.33
PTPRA-208ENST00000455631 NBASA2RRP1 2371 aa23.36■■□□□ 1.33
PTPRA-208ENST00000455631 IGHV5-10-1A0A0J9YXX1 117 aa23.35■■□□□ 1.33
PTPRA-208ENST00000455631 BLACEA4D250 179 aa23.35■■□□□ 1.33
PTPRA-208ENST00000455631 RHPN2P1A8MT19 583 aa23.35■■□□□ 1.33
PTPRA-208ENST00000455631 ZNF891A8MT65 544 aaPredicted RBP23.35■■□□□ 1.33
PTPRA-208ENST00000455631 PRKCGP05129 697 aa23.35■■□□□ 1.33
PTPRA-208ENST00000455631 KELP23276 732 aa23.35■■□□□ 1.33
PTPRA-208ENST00000455631 MMP12P39900 470 aa23.35■■□□□ 1.33
PTPRA-208ENST00000455631 BPIFB4P59827 614 aa23.35■■□□□ 1.33
PTPRA-208ENST00000455631 AGERQ15109 404 aa23.35■■□□□ 1.33
PTPRA-208ENST00000455631 TAF3Q5VWG9 929 aa23.35■■□□□ 1.33
PTPRA-208ENST00000455631 CACNA2D3Q8IZS8 1091 aa23.35■■□□□ 1.33
PTPRA-208ENST00000455631 MSANTD4Q8NCY6 345 aa23.35■■□□□ 1.33
PTPRA-208ENST00000455631 CCDC112Q8NEF3 446 aa23.35■■□□□ 1.33
PTPRA-208ENST00000455631 PSMG3-AS1Q96PY0 264 aa23.35■■□□□ 1.33
PTPRA-208ENST00000455631 CDH19Q9H159 772 aa23.35■■□□□ 1.33
PTPRA-208ENST00000455631 CYP4F12Q9HCS2 524 aa23.35■■□□□ 1.33
PTPRA-208ENST00000455631 TSPAN11A1L157 253 aa23.34■■□□□ 1.33
PTPRA-208ENST00000455631 GTPBP10A4D1E9 387 aaKnown RBP23.34■■□□□ 1.33
PTPRA-208ENST00000455631 CYP11B1P15538 503 aa23.34■■□□□ 1.33
PTPRA-208ENST00000455631 C15orf59Q2T9L4 293 aaPredicted RBP23.34■■□□□ 1.33
PTPRA-208ENST00000455631 INO80DQ53TQ3 878 aaPredicted RBP23.34■■□□□ 1.33
PTPRA-208ENST00000455631 SMYD5Q6GMV2 418 aa23.34■■□□□ 1.33
PTPRA-208ENST00000455631 FAM71AQ8IYT1 594 aa23.34■■□□□ 1.33
PTPRA-208ENST00000455631 ART4Q93070 314 aa23.34■■□□□ 1.33
PTPRA-208ENST00000455631 MAGEB5Q9BZ81 275 aa23.34■■□□□ 1.33
PTPRA-208ENST00000455631 KLC2Q9H0B6 622 aa23.34■■□□□ 1.33
PTPRA-208ENST00000455631 SUV39H2Q9H5I1 410 aa23.34■■□□□ 1.33
PTPRA-208ENST00000455631 SUDS3Q9H7L9 328 aaPredicted RBP23.34■■□□□ 1.33
PTPRA-208ENST00000455631 LHX3Q9UBR4 397 aa23.34■■□□□ 1.33
PTPRA-208ENST00000455631 PLAAQ9Y263 795 aa23.34■■□□□ 1.33
PTPRA-208ENST00000455631 ATP8A1Q9Y2Q0 1164 aa23.34■■□□□ 1.33
PTPRA-208ENST00000455631 B3GALT1Q9Y5Z6 326 aa23.34■■□□□ 1.33
PTPRA-208ENST00000455631 TEX15Q9BXT5 2789 aa23.34■■□□□ 1.33
PTPRA-208ENST00000455631 PLEKP08567 350 aaPredicted RBP23.33■■□□□ 1.33
PTPRA-208ENST00000455631 BIRC2Q13490 618 aa23.33■■□□□ 1.33
PTPRA-208ENST00000455631 DNAAF5Q86Y56 855 aa23.33■■□□□ 1.33
PTPRA-208ENST00000455631 HCAR2Q8TDS4 363 aa23.33■■□□□ 1.33
PTPRA-208ENST00000455631 TNFRSF10CO14798 259 aa23.32■■□□□ 1.32
PTPRA-208ENST00000455631 ZW10O43264 779 aa23.32■■□□□ 1.32
PTPRA-208ENST00000455631 RAD1O60671 282 aa23.32■■□□□ 1.32
PTPRA-208ENST00000455631 PRKAR1AP10644 381 aa23.32■■□□□ 1.32
PTPRA-208ENST00000455631 SDC4P31431 198 aa23.32■■□□□ 1.32
PTPRA-208ENST00000455631 CLPPQ16740 277 aaPredicted RBP23.32■■□□□ 1.32
PTPRA-208ENST00000455631 ARCQ7LC44 396 aa23.32■■□□□ 1.32
PTPRA-208ENST00000455631 ZNF438Q7Z4V0 828 aa23.32■■□□□ 1.32
PTPRA-208ENST00000455631 ELOA2Q8IYF1 753 aaPredicted RBP23.32■■□□□ 1.32
PTPRA-208ENST00000455631 CCDC185Q8N715 623 aa23.32■■□□□ 1.32
PTPRA-208ENST00000455631 AGBL5Q8NDL9 886 aa23.32■■□□□ 1.32
PTPRA-208ENST00000455631 ZDHHC1Q8WTX9 485 aa23.32■■□□□ 1.32
PTPRA-208ENST00000455631 CPA5Q8WXQ8 436 aa23.32■■□□□ 1.32
PTPRA-208ENST00000455631 DDA1Q9BW61 102 aa23.32■■□□□ 1.32
PTPRA-208ENST00000455631 NOL6Q9H6R4 1146 aaKnown RBP23.32■■□□□ 1.32
PTPRA-208ENST00000455631 SPATS2LQ9NUQ6 558 aaKnown RBP23.32■■□□□ 1.32
PTPRA-208ENST00000455631 PRSS38A1L453 326 aa23.31■■□□□ 1.32
PTPRA-208ENST00000455631 RECQL5O94762 991 aaPredicted RBP23.31■■□□□ 1.32
PTPRA-208ENST00000455631 LSM8O95777 96 aaKnown RBP23.31■■□□□ 1.32
PTPRA-208ENST00000455631 RAPGEF1Q13905 1077 aa23.31■■□□□ 1.32
PTPRA-208ENST00000455631 GRM3Q14832 879 aa23.31■■□□□ 1.32
PTPRA-208ENST00000455631 TSR1Q2NL82 804 aaKnown RBP23.31■■□□□ 1.32
PTPRA-208ENST00000455631 BRAT1Q6PJG6 821 aa23.31■■□□□ 1.32
PTPRA-208ENST00000455631 ZSWIM9Q86XI8 627 aa23.31■■□□□ 1.32
PTPRA-208ENST00000455631 LGR4Q9BXB1 951 aa23.31■■□□□ 1.32
PTPRA-208ENST00000455631 WDR26Q9H7D7 661 aa23.31■■□□□ 1.32
PTPRA-208ENST00000455631 LRRC4CQ9HCJ2 640 aa23.31■■□□□ 1.32
PTPRA-208ENST00000455631 SLC39A1Q9NY26 324 aa23.31■■□□□ 1.32
PTPRA-208ENST00000455631 NKX2-8O15522 239 aa23.3■■□□□ 1.32
PTPRA-208ENST00000455631 CD1CP29017 333 aa23.3■■□□□ 1.32
PTPRA-208ENST00000455631 CSTF2P33240 577 aaKnown RBP eCLIP23.3■■□□□ 1.32
PTPRA-208ENST00000455631 LIMK2P53671 638 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms