RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 MGAT1P26572 445 aa16.66■□□□□ 0.26
CCDC90B-202ENST00000455220 P2RY2P41231 377 aa16.66■□□□□ 0.26
CCDC90B-202ENST00000455220 DHX9Q08211 1270 aaKnown RBP16.66■□□□□ 0.26
CCDC90B-202ENST00000455220 CNTN1Q12860 1018 aa16.66■□□□□ 0.26
CCDC90B-202ENST00000455220 MTM1Q13496 603 aa16.66■□□□□ 0.26
CCDC90B-202ENST00000455220 PIP5KL1Q5T9C9 394 aa16.66■□□□□ 0.26
CCDC90B-202ENST00000455220 CEP128Q6ZU80 1094 aa16.66■□□□□ 0.26
CCDC90B-202ENST00000455220 USP45Q70EL2 814 aa16.66■□□□□ 0.26
CCDC90B-202ENST00000455220 RELL1Q8IUW5 271 aa16.66■□□□□ 0.26
CCDC90B-202ENST00000455220 NDUFAF2Q8N183 169 aa16.66■□□□□ 0.26
CCDC90B-202ENST00000455220 SMIM14Q96QK8 99 aa16.66■□□□□ 0.26
CCDC90B-202ENST00000455220 RANBP9Q96S59 729 aa16.66■□□□□ 0.26
CCDC90B-202ENST00000455220 WDR83Q9BRX9 315 aaKnown RBP16.66■□□□□ 0.26
CCDC90B-202ENST00000455220 HACD3Q9P035 362 aa16.66■□□□□ 0.26
CCDC90B-202ENST00000455220 SPO11Q9Y5K1 396 aa16.66■□□□□ 0.26
CCDC90B-202ENST00000455220 ZDBF2Q9HCK1 2354 aa16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 SPINT1O43278 529 aa16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 PI15O43692 258 aa16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 PAPSS2O95340 614 aaPredicted RBP16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 PRKCGP05129 697 aa16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 ALPIP09923 528 aa16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 CTPS1P17812 591 aa16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 NFKBIAP25963 317 aa16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 HNF1BP35680 557 aa16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 ABL2P42684 1182 aa16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 CLCN5P51795 746 aa16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 CDKN3Q16667 212 aa16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 BBS9Q3SYG4 887 aa16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 AGBL4Q5VU57 503 aa16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 FBXL19Q6PCT2 694 aa16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 USP30Q70CQ3 517 aa16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 TTC7BQ86TV6 843 aa16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 CACUL1Q86Y37 369 aa16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 MPP5Q8N3R9 675 aa16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 TSTD1Q8NFU3 115 aa16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 BRSK1Q8TDC3 778 aa16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 RAB7BQ96AH8 199 aa16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 TRABDQ9H4I3 376 aa16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 PCDH12Q9NPG4 1184 aa16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 SYBUQ9NX95 663 aa16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 TEX264Q9Y6I9 313 aa16.65■□□□□ 0.26
CCDC90B-202ENST00000455220 A0A1W2PP55 124 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 NPIPB15A6NHN6 443 aaPredicted RBP16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 AREL1O15033 823 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 BANF1O75531 89 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 FAM153BP0C7A2 387 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 PIRTP0C851 137 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 MMP12P39900 470 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 CCDC15Q0P6D6 951 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 PDIA2Q13087 525 aaKnown RBP16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 POU6F1Q14863 301 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 PTPRRQ15256 657 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 FAM153CQ494X1 144 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 TTC31Q49AM3 519 aaPredicted RBP16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 PCID2Q5JVF3 399 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 RASSF3Q86WH2 238 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 MDGA1Q8NFP4 955 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 BLOC1S5Q8TDH9 187 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 AENQ8WTP8 325 aaKnown RBP16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 PTCD2Q8WV60 388 aaKnown RBP16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 HMGB4Q8WW32 186 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 MRM3Q9HC36 420 aaKnown RBP16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 SAYSD1Q9NPB0 183 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 B4GALT6Q9UBX8 382 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 SERGEFQ9UGK8 458 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 ZNF711Q9Y462 761 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 HEATR9A2RTY3 570 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 PLK4O00444 970 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 SLC7A4O43246 635 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 AP1G1O43747 822 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 ALDH1A2O94788 518 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 CYP2A6P11509 494 aaPredicted RBP16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 LHCGRP22888 699 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 XPAP23025 273 aaPredicted RBP16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 ADRA1DP25100 572 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 CCR3P51677 355 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 CRADDP78560 199 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 ELP6Q0PNE2 266 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 SFSWAPQ12872 951 aaKnown RBP16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 FASTKD3Q14CZ7 662 aaKnown RBP16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 LRRC73Q5JTD7 316 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 ERAP2Q6P179 960 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 EMBQ6PCB8 327 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 KIAA1324Q6UXG2 1013 aaKnown RBP16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 DPPA4Q7L190 304 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 KBTBD6Q86V97 674 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 CCDC25Q86WR0 208 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 TTC30BQ8N4P2 665 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 HDDC3Q8N4P3 179 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 HHIPQ96QV1 700 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 EBNA1BP2Q99848 306 aaKnown RBP16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 NAT9Q9BTE0 207 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 KIFC1Q9BW19 673 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 TXLNGYQ9BZA5 131 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 FBXL12Q9NXK8 326 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 USP36Q9P275 1121 aaKnown RBP16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 FZD4Q9ULV1 537 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 SOX13Q9UN79 622 aa16.64■□□□□ 0.25
CCDC90B-202ENST00000455220 TCAF1Q9Y4C2 921 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms