RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 C11orf87Q6NUJ2 197 aa4.11□□□□□ -1.75
VPS8-211ENST00000452140 CCDC129Q6ZRS4 1044 aa4.11□□□□□ -1.75
VPS8-211ENST00000452140 SFTPA2Q8IWL1 248 aa4.11□□□□□ -1.75
VPS8-211ENST00000452140 CCDC105Q8IYK2 499 aa4.11□□□□□ -1.75
VPS8-211ENST00000452140 SNAPC3Q92966 411 aa4.11□□□□□ -1.75
VPS8-211ENST00000452140 ARHGEF2Q92974 986 aaKnown RBP4.11□□□□□ -1.75
VPS8-211ENST00000452140 VOPP1Q96AW1 172 aa4.11□□□□□ -1.75
VPS8-211ENST00000452140 FAM149B1Q96BN6 582 aa4.11□□□□□ -1.75
VPS8-211ENST00000452140 URB1-AS1Q96HZ7 61 aa4.11□□□□□ -1.75
VPS8-211ENST00000452140 TREX2Q9BQ50 279 aaPredicted RBP4.11□□□□□ -1.75
VPS8-211ENST00000452140 C1QTNF5Q9BXJ0 243 aa4.11□□□□□ -1.75
VPS8-211ENST00000452140 WDR26Q9H7D7 661 aa4.11□□□□□ -1.75
VPS8-211ENST00000452140 CATSPERBQ9H7T0 1116 aa4.11□□□□□ -1.75
VPS8-211ENST00000452140 CLK4Q9HAZ1 481 aaKnown RBP4.11□□□□□ -1.75
VPS8-211ENST00000452140 ASAH2Q9NR71 780 aa4.11□□□□□ -1.75
VPS8-211ENST00000452140 RRP7BPQ9NSQ0 103 aa4.11□□□□□ -1.75
VPS8-211ENST00000452140 TMEM51Q9NW97 253 aa4.11□□□□□ -1.75
VPS8-211ENST00000452140 HCFC1R1Q9NWW0 138 aa4.11□□□□□ -1.75
VPS8-211ENST00000452140 RNF7Q9UBF6 113 aa4.11□□□□□ -1.75
VPS8-211ENST00000452140 ADD3Q9UEY8 706 aaKnown RBP4.11□□□□□ -1.75
VPS8-211ENST00000452140 VPS28Q9UK41 221 aa4.11□□□□□ -1.75
VPS8-211ENST00000452140 RAI2Q9Y5P3 530 aa4.11□□□□□ -1.75
VPS8-211ENST00000452140 SQORQ9Y6N5 450 aa4.11□□□□□ -1.75
VPS8-211ENST00000452140 ZNF521Q96K83 1311 aa4.11□□□□□ -1.75
VPS8-211ENST00000452140 PCSK5Q92824 1860 aa4.11□□□□□ -1.75
VPS8-211ENST00000452140 A0A1B0GVT2 93 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 RPS10-NUDT3A0A1W2PQS6 291 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 BTBD18B2RXH4 712 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 MS4A18H0YCH9 400 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 J3KR12 359 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 TAF4O00268 1085 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 TNFRSF13BO14836 293 aaPredicted RBP4.1□□□□□ -1.75
VPS8-211ENST00000452140 TIMM23O14925 209 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 ITM2AO43736 263 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 LCATP04180 440 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 CYC1P08574 325 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 TMEM191BP0C7N4 346 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 ARSBP15848 533 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 TM4SF1P30408 202 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 HOXD13P35453 343 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 GARSP41250 739 aaKnown RBP4.1□□□□□ -1.75
VPS8-211ENST00000452140 RASSF2P50749 326 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 PLCD1P51178 756 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 CLCN3P51790 818 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 FOXD4Q12950 439 aaPredicted RBP4.1□□□□□ -1.75
VPS8-211ENST00000452140 PRKG2Q13237 762 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 DRAP1Q14919 205 aaPredicted RBP4.1□□□□□ -1.75
VPS8-211ENST00000452140 C2orf68Q2NKX9 166 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 KLHL35Q6PF15 583 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 MON1BQ7L1V2 547 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 GSTA5Q7RTV2 222 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 IRF2BP2Q7Z5L9 587 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 PIM3Q86V86 326 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 ARHGAP12Q8IWW6 846 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 SCFD2Q8WU76 684 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 ASB5Q8WWX0 329 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 C1orf74Q96LT6 269 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 CMTM3Q96MX0 182 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 ZNF570Q96NI8 536 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 MAP7D2Q96T17 732 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 CENPOQ9BU64 300 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 KAT14Q9H8E8 782 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 SLC28A3Q9HAS3 691 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 PLAC1Q9HBJ0 212 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 DLGAP2Q9P1A6 1054 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 SWAP70Q9UH65 585 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 ZNF215Q9UL58 517 aaPredicted RBP4.1□□□□□ -1.75
VPS8-211ENST00000452140 SRPRBQ9Y5M8 271 aaKnown RBP4.1□□□□□ -1.75
VPS8-211ENST00000452140 LYVE1Q9Y5Y7 322 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 RUSC2Q8N2Y8 1516 aa4.1□□□□□ -1.75
VPS8-211ENST00000452140 FAM237AA0A1B0GTK4 181 aa4.09□□□□□ -1.75
VPS8-211ENST00000452140 B4DGG1 531 aa4.09□□□□□ -1.75
VPS8-211ENST00000452140 VILLO15195 856 aa4.09□□□□□ -1.75
VPS8-211ENST00000452140 RGS14O43566 566 aa4.09□□□□□ -1.75
VPS8-211ENST00000452140 AHCYL1O43865 530 aa4.09□□□□□ -1.75
VPS8-211ENST00000452140 IPO7O95373 1038 aaKnown RBP4.09□□□□□ -1.75
VPS8-211ENST00000452140 CLTBP09497 229 aa4.09□□□□□ -1.75
VPS8-211ENST00000452140 GNLYP22749 145 aa4.09□□□□□ -1.75
VPS8-211ENST00000452140 MYF6P23409 242 aa4.09□□□□□ -1.75
VPS8-211ENST00000452140 LMO1P25800 156 aa4.09□□□□□ -1.75
VPS8-211ENST00000452140 NLRP5P59047 1200 aa4.09□□□□□ -1.75
VPS8-211ENST00000452140 ZP1P60852 638 aa4.09□□□□□ -1.75
VPS8-211ENST00000452140 MC1RQ01726 317 aa4.09□□□□□ -1.75
VPS8-211ENST00000452140 CREB5Q02930 508 aa4.09□□□□□ -1.75
VPS8-211ENST00000452140 NAE1Q13564 534 aa4.09□□□□□ -1.75
VPS8-211ENST00000452140 PDE1CQ14123 709 aaPredicted RBP4.09□□□□□ -1.75
VPS8-211ENST00000452140 CTTNQ14247 550 aaKnown RBP4.09□□□□□ -1.75
VPS8-211ENST00000452140 FNBP1LQ5T0N5 605 aa4.09□□□□□ -1.75
VPS8-211ENST00000452140 SPATA1Q5VX52 437 aa4.09□□□□□ -1.75
VPS8-211ENST00000452140 ZNF425Q6IV72 752 aa4.09□□□□□ -1.75
VPS8-211ENST00000452140 ANKRD54Q6NXT1 300 aa4.09□□□□□ -1.75
VPS8-211ENST00000452140 CLEC17AQ6ZS10 378 aa4.09□□□□□ -1.75
VPS8-211ENST00000452140 PATL1Q86TB9 770 aaKnown RBP4.09□□□□□ -1.75
VPS8-211ENST00000452140 BEST2Q8NFU1 509 aa4.09□□□□□ -1.75
VPS8-211ENST00000452140 TMEM163Q8TC26 289 aa4.09□□□□□ -1.75
VPS8-211ENST00000452140 FAM234AQ9H0X4 552 aa4.09□□□□□ -1.75
VPS8-211ENST00000452140 RBM38Q9H0Z9 239 aaKnown RBP4.09□□□□□ -1.75
VPS8-211ENST00000452140 SH2D4AQ9H788 454 aa4.09□□□□□ -1.75
VPS8-211ENST00000452140 RANGRFQ9HD47 186 aaPredicted RBP4.09□□□□□ -1.75
VPS8-211ENST00000452140 GPR108Q9NPR9 543 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms