RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 IHHQ14623 411 aa12.42□□□□□ -0.42
MSH5-209ENST00000450148 NFATC4Q14934 902 aa12.42□□□□□ -0.42
MSH5-209ENST00000450148 NFKBIBQ15653 356 aa12.42□□□□□ -0.42
MSH5-209ENST00000450148 SLC18A3Q16572 532 aa12.42□□□□□ -0.42
MSH5-209ENST00000450148 ALG11Q2TAA5 492 aa12.42□□□□□ -0.42
MSH5-209ENST00000450148 C6orf132Q5T0Z8 1188 aa12.42□□□□□ -0.42
MSH5-209ENST00000450148 CFAP58Q5T655 872 aa12.42□□□□□ -0.42
MSH5-209ENST00000450148 GUSBP11Q6P575 273 aa12.42□□□□□ -0.42
MSH5-209ENST00000450148 SLC35F3Q8IY50 421 aa12.42□□□□□ -0.42
MSH5-209ENST00000450148 CBARPQ8N350 705 aaPredicted RBP12.42□□□□□ -0.42
MSH5-209ENST00000450148 TEX26Q8N6G2 289 aa12.42□□□□□ -0.42
MSH5-209ENST00000450148 ZNF564Q8TBZ8 553 aaPredicted RBP12.42□□□□□ -0.42
MSH5-209ENST00000450148 IFI44Q8TCB0 444 aa12.42□□□□□ -0.42
MSH5-209ENST00000450148 TSACCQ96A04 125 aaPredicted RBP12.42□□□□□ -0.42
MSH5-209ENST00000450148 DNAJC7Q99615 494 aa12.42□□□□□ -0.42
MSH5-209ENST00000450148 NOD2Q9HC29 1040 aa12.42□□□□□ -0.42
MSH5-209ENST00000450148 SCUBE2Q9NQ36 999 aa12.42□□□□□ -0.42
MSH5-209ENST00000450148 OR1A2Q9Y585 309 aa12.42□□□□□ -0.42
MSH5-209ENST00000450148 PCDHB1Q9Y5F3 818 aa12.42□□□□□ -0.42
MSH5-209ENST00000450148 PCDHGC4Q9Y5F7 938 aa12.42□□□□□ -0.42
MSH5-209ENST00000450148 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.42□□□□□ -0.427e-10■■□□□ 14.2
MSH5-209ENST00000450148 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.41□□□□□ -0.42
MSH5-209ENST00000450148 TMEM110-MUSTN1A8MSY1 372 aa12.41□□□□□ -0.42
MSH5-209ENST00000450148 CASC3O15234 703 aaKnown RBP12.41□□□□□ -0.42
MSH5-209ENST00000450148 YY2O15391 372 aa12.41□□□□□ -0.42
MSH5-209ENST00000450148 MFSD11O43934 449 aa12.41□□□□□ -0.42
MSH5-209ENST00000450148 SOCS5O75159 536 aa12.41□□□□□ -0.42
MSH5-209ENST00000450148 PROSCO94903 275 aa12.41□□□□□ -0.42
MSH5-209ENST00000450148 TGM2P21980 687 aa12.41□□□□□ -0.42
MSH5-209ENST00000450148 SERPINB6P35237 376 aa12.41□□□□□ -0.42
MSH5-209ENST00000450148 TRIM23P36406 574 aa12.41□□□□□ -0.42
MSH5-209ENST00000450148 HK3P52790 923 aa12.41□□□□□ -0.42
MSH5-209ENST00000450148 MAXP61244 160 aa12.41□□□□□ -0.42
MSH5-209ENST00000450148 ZNF235Q14590 738 aa12.41□□□□□ -0.42
MSH5-209ENST00000450148 PAFAH1B3Q15102 231 aaKnown RBP12.41□□□□□ -0.42
MSH5-209ENST00000450148 CDKN3Q16667 212 aa12.41□□□□□ -0.42
MSH5-209ENST00000450148 COL28A1Q2UY09 1125 aa12.41□□□□□ -0.42
MSH5-209ENST00000450148 PERM1Q5SV97 790 aa12.41□□□□□ -0.42
MSH5-209ENST00000450148 FAXCQ5TGI0 409 aa12.41□□□□□ -0.42
MSH5-209ENST00000450148 NCBP2-AS2Q69YL0 99 aa12.41□□□□□ -0.42
MSH5-209ENST00000450148 ATPAF2Q8N5M1 289 aa12.41□□□□□ -0.42
MSH5-209ENST00000450148 PCDH19Q8TAB3 1148 aa12.41□□□□□ -0.42
MSH5-209ENST00000450148 HNRNPLLQ8WVV9 542 aaKnown RBP12.41□□□□□ -0.42
MSH5-209ENST00000450148 FAF2Q96CS3 445 aa12.41□□□□□ -0.42
MSH5-209ENST00000450148 COQ10AQ96MF6 247 aa12.41□□□□□ -0.42
MSH5-209ENST00000450148 IL12RB2Q99665 862 aa12.41□□□□□ -0.42
MSH5-209ENST00000450148 SLC13A1Q9BZW2 595 aa12.41□□□□□ -0.42
MSH5-209ENST00000450148 UVRAGQ9P2Y5 699 aa12.41□□□□□ -0.42
MSH5-209ENST00000450148 B4GALT6Q9UBX8 382 aa12.41□□□□□ -0.42
MSH5-209ENST00000450148 ZFC3H1O60293 1989 aaKnown RBP12.41□□□□□ -0.42
MSH5-209ENST00000450148 CACNA1GO43497 2377 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 UNC13CQ8NB66 2214 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 SSU72P8A0A1W2PR75 194 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 TMEM202A6NGA9 273 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 A8MX80 341 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 FZD6O60353 706 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 PCCBP05166 539 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 HOXC4P09017 264 aaPredicted RBP12.4□□□□□ -0.42
MSH5-209ENST00000450148 ELFN1P0C7U0 828 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 LHCGRP22888 699 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 MMP13P45452 471 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 KIAA1024LP59773 190 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 POLR2LP62875 67 aaKnown RBP12.4□□□□□ -0.42
MSH5-209ENST00000450148 GALNT2Q10471 571 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 KRT81Q14533 505 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 PTPRRQ15256 657 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 CNGA3Q16281 694 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 SKOR2Q2VWA4 1001 aaPredicted RBP12.4□□□□□ -0.42
MSH5-209ENST00000450148 RALGPS1Q5JS13 557 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 ALG1LQ6GMV1 187 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 ESRP1Q6NXG1 681 aaKnown RBP12.4□□□□□ -0.42
MSH5-209ENST00000450148 ENPP7Q6UWV6 458 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 EFL1Q7Z2Z2 1120 aaKnown RBP12.4□□□□□ -0.42
MSH5-209ENST00000450148 LRRC49Q8IUZ0 686 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 HID1Q8IV36 788 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 FSTL5Q8N475 847 aaPredicted RBP12.4□□□□□ -0.42
MSH5-209ENST00000450148 PQLC3Q8N755 202 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 OR8K1Q8NGG5 319 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 MAML1Q92585 1016 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 PDXPQ96GD0 296 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 WDR92Q96MX6 357 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 CHP1Q99653 195 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 ZNF670Q9BS34 389 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 LGR4Q9BXB1 951 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 PPIL1Q9Y3C6 166 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 DGKBQ9Y6T7 804 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 CELSR3Q9NYQ7 3312 aa12.4□□□□□ -0.42
MSH5-209ENST00000450148 SCN8AQ9UQD0 1980 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 ZFYVE26Q68DK2 2539 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 A0A1W2PNU3 283 aaPredicted RBP12.39□□□□□ -0.43
MSH5-209ENST00000450148 A0A1W2PQ67 120 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 CPED1A4D0V7 1026 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 BRINP1O60477 761 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 CSO75390 466 aaKnown RBP12.39□□□□□ -0.43
MSH5-209ENST00000450148 HEXIM1O94992 359 aaKnown RBP12.39□□□□□ -0.43
MSH5-209ENST00000450148 RASGRP1O95267 797 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 PGLSO95336 258 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 ANXA6P08133 673 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 H2AFZP0C0S5 128 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 TMEM253P0C7T8 217 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms