RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 PCDH19Q8TAB3 1148 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 CHP1Q99653 195 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 MGME1Q9BQP7 344 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 ZNF670Q9BS34 389 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 APOOQ9BUR5 198 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 TCEAL2Q9H3H9 227 aaPredicted RBP20.18■□□□□ 0.82
LRCH3-208ENST00000443727 NT5MQ9NPB1 228 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 SPTLC3Q9NUV7 552 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 CLCA2Q9UQC9 943 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 OR1A2Q9Y585 309 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 TAF4O00268 1085 aa20.17■□□□□ 0.82
LRCH3-208ENST00000443727 MFSD11O43934 449 aa20.17■□□□□ 0.82
LRCH3-208ENST00000443727 CAPNS1P04632 268 aa20.17■□□□□ 0.82
LRCH3-208ENST00000443727 ANXA6P08133 673 aa20.17■□□□□ 0.82
LRCH3-208ENST00000443727 MAN1A1P33908 653 aa20.17■□□□□ 0.82
LRCH3-208ENST00000443727 ARSEP51690 589 aa20.17■□□□□ 0.82
LRCH3-208ENST00000443727 RALGDSQ12967 914 aa20.17■□□□□ 0.82
LRCH3-208ENST00000443727 AGERQ15109 404 aa20.17■□□□□ 0.82
LRCH3-208ENST00000443727 RALGPS1Q5JS13 557 aa20.17■□□□□ 0.82
LRCH3-208ENST00000443727 NCBP2-AS2Q69YL0 99 aa20.17■□□□□ 0.82
LRCH3-208ENST00000443727 ENPP7Q6UWV6 458 aa20.17■□□□□ 0.82
LRCH3-208ENST00000443727 LIPIQ6XZB0 460 aa20.17■□□□□ 0.82
LRCH3-208ENST00000443727 RD3Q7Z3Z2 195 aa20.17■□□□□ 0.82
LRCH3-208ENST00000443727 SLC35G2Q8TBE7 412 aa20.17■□□□□ 0.82
LRCH3-208ENST00000443727 GLMNQ92990 594 aa20.17■□□□□ 0.82
LRCH3-208ENST00000443727 ANP32EQ9BTT0 268 aa20.17■□□□□ 0.82
LRCH3-208ENST00000443727 ABCG4Q9H172 646 aa20.17■□□□□ 0.82
LRCH3-208ENST00000443727 HAUS2Q9NVX0 235 aa20.17■□□□□ 0.82
LRCH3-208ENST00000443727 DOLKQ9UPQ8 538 aa20.17■□□□□ 0.82
LRCH3-208ENST00000443727 CPED1A4D0V7 1026 aa20.16■□□□□ 0.82
LRCH3-208ENST00000443727 AKR1B15C9JRZ8 316 aaPredicted RBP20.16■□□□□ 0.82
LRCH3-208ENST00000443727 TPP1O14773 563 aa20.16■□□□□ 0.82
LRCH3-208ENST00000443727 HTRA2O43464 458 aaPredicted RBP20.16■□□□□ 0.82
LRCH3-208ENST00000443727 CTSEP14091 401 aa20.16■□□□□ 0.82
LRCH3-208ENST00000443727 CR2P20023 1033 aa20.16■□□□□ 0.82
LRCH3-208ENST00000443727 GARSP41250 739 aaKnown RBP20.16■□□□□ 0.82
LRCH3-208ENST00000443727 INSM1Q01101 510 aaPredicted RBP20.16■□□□□ 0.82
LRCH3-208ENST00000443727 GALNT2Q10471 571 aa20.16■□□□□ 0.82
LRCH3-208ENST00000443727 MTM1Q13496 603 aa20.16■□□□□ 0.82
LRCH3-208ENST00000443727 NFATC4Q14934 902 aa20.16■□□□□ 0.82
LRCH3-208ENST00000443727 PAFAH1B3Q15102 231 aaKnown RBP20.16■□□□□ 0.82
LRCH3-208ENST00000443727 CDKN3Q16667 212 aa20.16■□□□□ 0.82
LRCH3-208ENST00000443727 TIGD7Q6NT04 549 aaPredicted RBP20.16■□□□□ 0.82
LRCH3-208ENST00000443727 TSACCQ96A04 125 aaPredicted RBP20.16■□□□□ 0.82
LRCH3-208ENST00000443727 NXPE2Q96DL1 559 aa20.16■□□□□ 0.82
LRCH3-208ENST00000443727 NSMCE3Q96MG7 304 aa20.16■□□□□ 0.82
LRCH3-208ENST00000443727 LRRC61Q9BV99 259 aa20.16■□□□□ 0.82
LRCH3-208ENST00000443727 TRIM5Q9C035 493 aa20.16■□□□□ 0.82
LRCH3-208ENST00000443727 B4GALT6Q9UBX8 382 aa20.16■□□□□ 0.82
LRCH3-208ENST00000443727 KLQ9UEF7 1012 aa20.16■□□□□ 0.82
LRCH3-208ENST00000443727 TTLL3Q9Y4R7 772 aa20.16■□□□□ 0.82
LRCH3-208ENST00000443727 AK5Q9Y6K8 562 aa20.16■□□□□ 0.82
LRCH3-208ENST00000443727 KNTC1P50748 2209 aa20.15■□□□□ 0.82
LRCH3-208ENST00000443727 ANKRD11Q6UB99 2663 aaPredicted RBP20.15■□□□□ 0.82
LRCH3-208ENST00000443727 LMO7DNF2Z398 122 aa20.15■□□□□ 0.82
LRCH3-208ENST00000443727 CACNB4O00305 520 aaPredicted RBP20.15■□□□□ 0.82
LRCH3-208ENST00000443727 GCATO75600 419 aa20.15■□□□□ 0.82
LRCH3-208ENST00000443727 RASGRP1O95267 797 aa20.15■□□□□ 0.82
LRCH3-208ENST00000443727 MAP3K6O95382 1288 aa20.15■□□□□ 0.82
LRCH3-208ENST00000443727 CYP2A6P11509 494 aaPredicted RBP20.15■□□□□ 0.82
LRCH3-208ENST00000443727 KRT10P13645 584 aa20.15■□□□□ 0.82
LRCH3-208ENST00000443727 TSHRP16473 764 aa20.15■□□□□ 0.82
LRCH3-208ENST00000443727 ARHGAP25P42331 645 aa20.15■□□□□ 0.82
LRCH3-208ENST00000443727 RPIAP49247 311 aa20.15■□□□□ 0.82
LRCH3-208ENST00000443727 HK3P52790 923 aa20.15■□□□□ 0.82
LRCH3-208ENST00000443727 NR0B2Q15466 257 aa20.15■□□□□ 0.82
LRCH3-208ENST00000443727 TCEA2Q15560 299 aa20.15■□□□□ 0.82
LRCH3-208ENST00000443727 IFI16Q16666 785 aaKnown RBP20.15■□□□□ 0.82
LRCH3-208ENST00000443727 ODF2Q5BJF6 829 aa20.15■□□□□ 0.82
LRCH3-208ENST00000443727 ARMC12Q5T9G4 340 aa20.15■□□□□ 0.82
LRCH3-208ENST00000443727 DENND2CQ68D51 928 aa20.15■□□□□ 0.82
LRCH3-208ENST00000443727 RHOT2Q8IXI1 618 aa20.15■□□□□ 0.82
LRCH3-208ENST00000443727 FSTL5Q8N475 847 aaPredicted RBP20.15■□□□□ 0.82
LRCH3-208ENST00000443727 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.15■□□□□ 0.82
LRCH3-208ENST00000443727 PLA2G15Q8NCC3 412 aa20.15■□□□□ 0.82
LRCH3-208ENST00000443727 IFI44Q8TCB0 444 aa20.15■□□□□ 0.82
LRCH3-208ENST00000443727 SCG3Q8WXD2 468 aaKnown RBP20.15■□□□□ 0.82
LRCH3-208ENST00000443727 RFFLQ8WZ73 363 aa20.15■□□□□ 0.82
LRCH3-208ENST00000443727 TBATAQ96M53 351 aa20.15■□□□□ 0.82
LRCH3-208ENST00000443727 WDR92Q96MX6 357 aa20.15■□□□□ 0.82
LRCH3-208ENST00000443727 ZNF830Q96NB3 372 aaPredicted RBP20.15■□□□□ 0.82
LRCH3-208ENST00000443727 SEMA3CQ99985 751 aa20.15■□□□□ 0.82
LRCH3-208ENST00000443727 POLR1EQ9GZS1 481 aaKnown RBP20.15■□□□□ 0.82
LRCH3-208ENST00000443727 SALL4Q9UJQ4 1053 aa20.15■□□□□ 0.82
LRCH3-208ENST00000443727 PNMA8BQ9ULN7 279 aaPredicted RBP20.15■□□□□ 0.82
LRCH3-208ENST00000443727 PHTF1Q9UMS5 762 aa20.15■□□□□ 0.82
LRCH3-208ENST00000443727 RAXQ9Y2V3 346 aa20.15■□□□□ 0.82
LRCH3-208ENST00000443727 LRRD1A4D1F6 860 aa20.14■□□□□ 0.81
LRCH3-208ENST00000443727 OPA1O60313 960 aa20.14■□□□□ 0.81
LRCH3-208ENST00000443727 MT-CO3P00414 261 aa20.14■□□□□ 0.81
LRCH3-208ENST00000443727 GP1BAP07359 652 aa20.14■□□□□ 0.81
LRCH3-208ENST00000443727 ALPIP09923 528 aa20.14■□□□□ 0.81
LRCH3-208ENST00000443727 MX2P20592 715 aa20.14■□□□□ 0.81
LRCH3-208ENST00000443727 VIPR1P32241 457 aa20.14■□□□□ 0.81
LRCH3-208ENST00000443727 SRP54P61011 504 aaKnown RBP20.14■□□□□ 0.81
LRCH3-208ENST00000443727 TRAF2Q12933 501 aa20.14■□□□□ 0.81
LRCH3-208ENST00000443727 ARHGEF7Q14155 803 aa20.14■□□□□ 0.81
LRCH3-208ENST00000443727 ELOCQ15369 112 aa20.14■□□□□ 0.81
LRCH3-208ENST00000443727 ALG11Q2TAA5 492 aa20.14■□□□□ 0.81
LRCH3-208ENST00000443727 USP45Q70EL2 814 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms