RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 QPCTQ16769 361 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 ODF2Q5BJF6 829 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 KCTD16Q68DU8 428 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 ADAT2Q7Z6V5 191 aaKnown RBP12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 ABI3BPQ7Z7G0 1075 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 GLIS1Q8NBF1 620 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 TRIM58Q8NG06 486 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 OR13H1Q8NG92 308 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 NSMCE1Q8WV22 266 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 EID2BQ96D98 161 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 MLPHQ9BV36 600 aaPredicted RBP12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 SLC17A9Q9BYT1 436 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 SLC25A51Q9H1U9 297 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 SMARCAL1Q9NZC9 954 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 UBP1Q9NZI7 540 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 SUSD2Q9UGT4 822 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 DNPEPQ9ULA0 475 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 DMTF1Q9Y222 760 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 TTLL3Q9Y4R7 772 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 H7C0C1 242 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 HEXIM1O94992 359 aaKnown RBP12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 C1SP09871 688 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 ATXN1LP0C7T5 689 aaKnown RBP12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 HNRNPA2B1P22626 353 aaKnown RBP12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 CD38P28907 300 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 CXCR5P32302 372 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 HNF1BP35680 557 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 DPP6P42658 865 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 ATP5OP48047 213 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 LIG3P49916 1009 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 AFF3P51826 1226 aaKnown RBP12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 LIMK1P53667 647 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 NXPH1P58417 271 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 RPS21P63220 83 aaKnown RBP12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 ITKQ08881 620 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 CCDC173Q0VFZ6 552 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 AGERQ15109 404 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 IRF4Q15306 451 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 SLC14A2Q15849 920 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 WSCD2Q2TBF2 565 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 AASDHQ4L235 1098 aaPredicted RBP12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 SETMARQ53H47 684 aaPredicted RBP12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 PRAMEF14Q5SWL7 426 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 ARMC12Q5T9G4 340 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 STPG1Q5TH74 334 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 HSD11B1LQ7Z5J1 315 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 PRUNE1Q86TP1 453 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 BBS5Q8N3I7 341 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 MINDY1Q8N5J2 469 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 PLA2G15Q8NCC3 412 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 CEP76Q8TAP6 659 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 CCDC110Q8TBZ0 833 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 PDCD6IPQ8WUM4 868 aaKnown RBP12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 ASB12Q8WXK4 309 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 MRGPRX2Q96LB1 330 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 COQ10AQ96MF6 247 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 WDR24Q96S15 920 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 ANKRD6Q9Y2G4 727 aa12.9□□□□□ -0.34
PDLIM2-212ENST00000443561 A0A0J9YYE9 177 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 CAPN8A6NHC0 703 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 C4orf47A7E2U8 309 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 PRAMEF26H0Y7S4 382 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 LIASO43766 372 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 TJP3O95049 919 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 SOD1P00441 154 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 TRBC1P01850 177 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 VIPR1P32241 457 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 CHRNA4P43681 627 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 SUOXP51687 545 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 PFN3P60673 137 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 FAM193AP78312 1265 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 LMNB2Q03252 620 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 ELP6Q0PNE2 266 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 GALNT3Q14435 633 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 RSPO4Q2I0M5 234 aaPredicted RBP12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 ZNF423Q2M1K9 1284 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 CRTC1Q6UUV9 634 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 MICALCLQ6ZW33 695 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 KANSL1Q7Z3B3 1105 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 RASGEF1CQ8N431 466 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 GPR161Q8N6U8 529 aaKnown RBP12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 C12orf50Q8NA57 414 aaPredicted RBP12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 LPCAT1Q8NF37 534 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 COG1Q8WTW3 980 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 C1orf54Q8WWF1 131 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 RTP4Q96DX8 246 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 SCRN2Q96FV2 425 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 FEM1CQ96JP0 617 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 LENG8Q96PV6 779 aaPredicted RBP12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 ALS2CR12Q96Q35 445 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 FCRL5Q96RD9 977 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 LYSMD1Q96S90 227 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 NUSAP1Q9BXS6 441 aaKnown RBP12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 GBA3Q9H227 469 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 PCDH9Q9HC56 1237 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 AASDHPPTQ9NRN7 309 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 DNAAF2Q9NVR5 837 aaKnown RBP12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 DLL3Q9NYJ7 618 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 PHTF1Q9UMS5 762 aa12.89□□□□□ -0.35
PDLIM2-212ENST00000443561 SPO11Q9Y5K1 396 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms