RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 PABPC4LP0CB38 370 aaKnown RBP6.56□□□□□ -1.36
HDAC6-210ENST00000441703 CPA3P15088 417 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 GM2AP17900 193 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 GNLYP22749 145 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 DGKAP23743 735 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 RPL13P26373 211 aaKnown RBP6.56□□□□□ -1.36
HDAC6-210ENST00000441703 PRKCIP41743 596 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 PTGIRP43119 386 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 UQCRFS1P47985 274 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 SLC18A1P54219 525 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 MARSP56192 900 aaKnown RBP6.56□□□□□ -1.36
HDAC6-210ENST00000441703 MGAT5Q09328 741 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 KLHL30Q0D2K2 578 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 OVGP1Q12889 678 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 STK4Q13043 487 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 MAP7Q14244 749 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 RCN2Q14257 317 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 SLC29A2Q14542 456 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 STAT4Q14765 748 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 LIN52Q52LA3 116 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 CRTC1Q6UUV9 634 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 PPP1R21Q6ZMI0 780 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 ARHGEF18Q6ZSZ5 1173 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 INTS8Q75QN2 995 aaKnown RBP6.56□□□□□ -1.36
HDAC6-210ENST00000441703 EFL1Q7Z2Z2 1120 aaKnown RBP6.56□□□□□ -1.36
HDAC6-210ENST00000441703 PEX26Q7Z412 305 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 PRPF39Q86UA1 669 aaKnown RBP6.56□□□□□ -1.36
HDAC6-210ENST00000441703 NT5DC3Q86UY8 548 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 IQCHQ86VS3 1027 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 GPBP1Q86WP2 473 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 VSIG1Q86XK7 387 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 SYCP3Q8IZU3 236 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 SLC25A45Q8N413 288 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 ZBTB8BQ8NAP8 495 aaPredicted RBP6.56□□□□□ -1.36
HDAC6-210ENST00000441703 PHC3Q8NDX5 983 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 ZNF398Q8TD17 642 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 HTR3CQ8WXA8 447 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 SCG3Q8WXD2 468 aaKnown RBP6.56□□□□□ -1.36
HDAC6-210ENST00000441703 GFM2Q969S9 779 aaKnown RBP6.56□□□□□ -1.36
HDAC6-210ENST00000441703 SLC7A6OSQ96CW6 309 aaPredicted RBP6.56□□□□□ -1.36
HDAC6-210ENST00000441703 CDK5RAP3Q96JB5 506 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 CEP63Q96MT8 703 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 SMC6Q96SB8 1091 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 TSG101Q99816 390 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 TBC1D10AQ9BXI6 508 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 AP1M1Q9BXS5 423 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 ZNF518BQ9C0D4 1074 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 MTMR12Q9C0I1 747 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 LRRC27Q9C0I9 530 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 MYLK2Q9H1R3 596 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 CARD9Q9H257 536 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 PREBQ9HCU5 417 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 COMMD8Q9NX08 183 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 RBAKQ9NYW8 714 aaPredicted RBP6.56□□□□□ -1.36
HDAC6-210ENST00000441703 NLGN3Q9NZ94 848 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 IL37Q9NZH6 218 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 STX18Q9P2W9 335 aaKnown RBP6.56□□□□□ -1.36
HDAC6-210ENST00000441703 SUN2Q9UH99 717 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 PCYOX1Q9UHG3 505 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 AMFRQ9UKV5 643 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 TRIM33Q9UPN9 1127 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 KIF26BQ2KJY2 2108 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 UTP20O75691 2785 aaKnown RBP6.56□□□□□ -1.36
HDAC6-210ENST00000441703 POLQO75417 2590 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 ITPR2Q14571 2701 aa6.56□□□□□ -1.36
HDAC6-210ENST00000441703 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.55□□□□□ -1.36
HDAC6-210ENST00000441703 A0A1W2PP55 124 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 TMEM120BA0PK00 339 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 MAP3K7O43318 606 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 RIPK2O43353 540 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 ASLP04424 464 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 LYNP07948 512 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 H2AFZP0C0S5 128 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 JMJD7P0C870 316 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 T-ENOLP0DO92 83 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 TAC1P20366 129 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 CHRNA3P32297 505 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 CHKAP35790 457 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 ATP5C1P36542 298 aaKnown RBP6.55□□□□□ -1.36
HDAC6-210ENST00000441703 SERPINB4P48594 390 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 HARS2P49590 506 aaKnown RBP6.55□□□□□ -1.36
HDAC6-210ENST00000441703 PSMD7P51665 324 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 SLC5A3P53794 718 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 MLLT10P55197 1068 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 PHEXP78562 749 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 DR1Q01658 176 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 KLRB1Q12918 225 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 EIF3IQ13347 325 aaKnown RBP6.55□□□□□ -1.36
HDAC6-210ENST00000441703 ZNF177Q13360 481 aaPredicted RBP6.55□□□□□ -1.36
HDAC6-210ENST00000441703 SPIDRQ14159 915 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 CDKN3Q16667 212 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 FYB2Q5VWT5 728 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 C1QL3Q5VWW1 255 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 SCARA3Q6AZY7 606 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 CGB2Q6NT52 195 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 Q6ZNB5 142 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 H2AFVQ71UI9 128 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 SV2AQ7L0J3 742 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 RAB11FIP2Q7L804 512 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 DAAM2Q86T65 1068 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms