RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 SLC10A7Q0GE19 358 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 SLC10A2Q12908 348 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 GRM3Q14832 879 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 PSRC1Q6PGN9 363 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 LDB1Q86U70 411 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 SCUBE1Q8IWY4 988 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 PHC3Q8NDX5 983 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 OR4L1Q8NH43 312 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 CATSPER2Q96P56 530 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 ING2Q9H160 280 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 NMRK1Q9NWW6 199 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 SOX13Q9UN79 622 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 TCAF1Q9Y4C2 921 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 SLC9A3R1O14745 358 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 CD3EAPO15446 510 aaKnown RBP11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 LYPLA1O75608 230 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 HOXD8P13378 290 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 ATP5F1P24539 256 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 LIMK2P53671 638 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 CCDC15Q0P6D6 951 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 DDX39BQ13838 428 aaKnown RBP11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 PFKFB4Q16877 469 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 TPGS2Q68CL5 300 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 FAM45BPQ6NSW5 357 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 FAM45AQ8TCE6 357 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 DENND1AQ8TEH3 1009 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 FCRL5Q96RD9 977 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 EFCAB1Q9HAE3 211 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 MID1IP1Q9NPA3 183 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 SLC17A6Q9P2U8 582 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 F8W810 466 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 BIRC5O15392 142 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 ATP6V1C1P21283 382 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 GRIA4P48058 902 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 CCNG1P51959 295 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 MPP1Q00013 466 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 GALNT2Q10471 571 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 BOP1Q14137 746 aaKnown RBP11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 FSTL4Q6MZW2 842 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 USP45Q70EL2 814 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 TTC30BQ8N4P2 665 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 NAT16Q8N8M0 369 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 ZNF461Q8TAF7 563 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 NMUR1Q9HB89 426 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 ACSS2Q9NR19 701 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 FETUBQ9UGM5 382 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 ZNF487B1APH4 448 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 HLA-DQB2P05538 268 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 PBLDP30039 288 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 MAGEA11P43364 429 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 CAPRIN1Q14444 709 aaKnown RBP11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 POM121L1PQ3SYA9 428 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 AGKQ53H12 422 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 SDE2Q6IQ49 451 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 AFTPHQ6ULP2 937 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 TTC7BQ86TV6 843 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 STK40Q8N2I9 435 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 ZNF557Q8N988 423 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 KREMEN2Q8NCW0 462 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 B4GALNT2Q8NHY0 566 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 DIS3LQ8TF46 1054 aaKnown RBP11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 ERLEC1Q96DZ1 483 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 RBBP8Q99708 897 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 RAI2Q9Y5P3 530 aa11.62□□□□□ -0.55
TRAPPC9-202ENST00000438773 UBDO15205 165 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 AKAP10O43572 662 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 WFS1O76024 890 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 HAPLN1P10915 354 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 CES1P23141 567 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 TTPAP49638 278 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 RPL14P50914 215 aaKnown RBP11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 KCNK10P57789 538 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 ILF2Q12905 390 aaKnown RBP11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 CYLC2Q14093 348 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 STXBP5Q5T5C0 1151 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 IGDCC3Q8IVU1 814 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 DENND6AQ8IWF6 608 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 TCF25Q9BQ70 676 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 SAGE1Q9NXZ1 904 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 J3KR12 359 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 TBC1D4O60343 1298 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 NELFEP18615 380 aaKnown RBP11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 ZBTB17Q13105 803 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 RARS2Q5T160 578 aaKnown RBP11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 TXNDC8Q6A555 127 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 CLNKQ7Z7G1 428 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 BANPQ8N9N5 519 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 STAG3L4Q8TBR4 150 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 ZNF398Q8TD17 642 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 PTCD2Q8WV60 388 aaKnown RBP11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 NRG4Q8WWG1 115 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 CCT7Q99832 543 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 DCUN1D5Q9BTE7 237 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 CADM1Q9BY67 442 aaKnown RBP11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 CACYBPQ9HB71 228 aaKnown RBP11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 MAN1C1Q9NR34 630 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 ARL8BQ9NVJ2 186 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 THG1LQ9NWX6 298 aaKnown RBP11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 KIAA1522Q9P206 1035 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 THEGQ9P2T0 379 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms