RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 NPRL3Q12980 569 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 RAPSNQ13702 412 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 DAG1Q14118 895 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 E2F2Q14209 437 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 NDUFA5Q16718 116 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 UGP2Q16851 508 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 FAM98BQ52LJ0 330 aaKnown RBP5.6□□□□□ -1.51
RFC3-202ENST00000434425 HSP90AA4PQ58FG1 418 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 ZNF658Q5TYW1 1059 aaPredicted RBP5.6□□□□□ -1.51
RFC3-202ENST00000434425 SNRNP48Q6IEG0 339 aaKnown RBP5.6□□□□□ -1.51
RFC3-202ENST00000434425 KIAA1161Q6NSJ0 714 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 METTL2BQ6P1Q9 378 aaKnown RBP5.6□□□□□ -1.51
RFC3-202ENST00000434425 SUSD1Q6UWL2 747 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 FAM83HQ6ZRV2 1179 aaPredicted RBP5.6□□□□□ -1.51
RFC3-202ENST00000434425 DDX53Q86TM3 631 aaKnown RBP5.6□□□□□ -1.51
RFC3-202ENST00000434425 VASH2Q86V25 355 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 DNAAF5Q86Y56 855 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 CCNJLQ8IV13 435 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 CMIPQ8IY22 773 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 LIX1Q8N485 282 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 CMASQ8NFW8 434 aaPredicted RBP5.6□□□□□ -1.51
RFC3-202ENST00000434425 PIP4K2CQ8TBX8 421 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 IRGQQ8WZA9 623 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 MRPS27Q92552 414 aaKnown RBP5.6□□□□□ -1.51
RFC3-202ENST00000434425 PRCCQ92733 491 aaPredicted RBP5.6□□□□□ -1.51
RFC3-202ENST00000434425 GRAMD1AQ96CP6 724 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 NEIL1Q96FI4 390 aaPredicted RBP5.6□□□□□ -1.51
RFC3-202ENST00000434425 PGM2Q96G03 612 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 FGD4Q96M96 766 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 NR1H4Q96RI1 486 aaPredicted RBP5.6□□□□□ -1.51
RFC3-202ENST00000434425 PIP5K1AQ99755 562 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 MTG1Q9BT17 334 aaPredicted RBP5.6□□□□□ -1.51
RFC3-202ENST00000434425 GPR61Q9BZJ8 451 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 PCED1AQ9H1Q7 454 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 ST6GALNAC4Q9H4F1 302 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 IL23AQ9NPF7 189 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 CCM2LQ9NUG4 571 aaPredicted RBP5.6□□□□□ -1.51
RFC3-202ENST00000434425 DZANK1Q9NVP4 752 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 ZNF446Q9NWS9 450 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 SMPD3Q9NY59 655 aaPredicted RBP5.6□□□□□ -1.51
RFC3-202ENST00000434425 STX18Q9P2W9 335 aaKnown RBP5.6□□□□□ -1.51
RFC3-202ENST00000434425 SEC63Q9UGP8 760 aaKnown RBP5.6□□□□□ -1.51
RFC3-202ENST00000434425 RNF112Q9ULX5 631 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 TBX20Q9UMR3 447 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 PCDHA7Q9UN72 937 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 BACE2Q9Y5Z0 518 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 PSAT1Q9Y617 370 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 BZW2Q9Y6E2 419 aaKnown RBP5.6□□□□□ -1.51
RFC3-202ENST00000434425 WDR87Q6ZQQ6 2873 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 GRIN2DO15399 1336 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 NEDD4P46934 1319 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 MROH7Q68CQ1 1323 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 SYNGAP1Q96PV0 1343 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 STK36Q9NRP7 1315 aa5.6□□□□□ -1.51
RFC3-202ENST00000434425 TRIP12Q14669 1992 aaPredicted RBP5.6□□□□□ -1.51
RFC3-202ENST00000434425 SCN5AQ14524 2016 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 ROBO3Q96MS0 1386 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 KLF18A0A0U1RQI7 1052 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.59□□□□□ -1.51
RFC3-202ENST00000434425 ARHGEF37A1IGU5 675 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 GSAPA4D1B5 854 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 GOLGA8IPA6NC78 632 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 H0Y8G0 127 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 GOLGA8RI6L899 631 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 ZNF213O14771 459 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 RAD51BO15315 384 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 GPAA1O43292 621 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 HCRTR2O43614 444 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 GMFGO60234 142 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 GCATO75600 419 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 RHBDL1O75783 438 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 CDC123O75794 336 aaPredicted RBP5.59□□□□□ -1.51
RFC3-202ENST00000434425 KRT37O76014 449 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 DIRAS3O95661 229 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 LIPFP07098 398 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 SUPT20HL2P0C7V6 817 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 DDX5P17844 614 aaKnown RBP5.59□□□□□ -1.51
RFC3-202ENST00000434425 CMA1P23946 247 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 ABCD3P28288 659 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 CST5P28325 142 aaPredicted RBP5.59□□□□□ -1.51
RFC3-202ENST00000434425 ARL3P36405 182 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 BMPR1AP36894 532 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 CDKN1BP46527 198 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 ALDH6A1Q02252 535 aaKnown RBP5.59□□□□□ -1.51
RFC3-202ENST00000434425 LGALS3BPQ08380 585 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 RCN2Q14257 317 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 LPIN1Q14693 890 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 SLC39A14Q15043 492 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 ZMYND11Q15326 602 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 RAB30Q15771 203 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 RARS2Q5T160 578 aaKnown RBP5.59□□□□□ -1.51
RFC3-202ENST00000434425 RIPPLY2Q5TAB7 128 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 DEPDC1Q5TB30 811 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 KRT40Q6A162 431 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 PTRHD1Q6GMV3 140 aaKnown RBP5.59□□□□□ -1.51
RFC3-202ENST00000434425 KIAA1211LQ6NV74 962 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 CNKSR3Q6P9H4 555 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 ABHD17CQ6PCB6 329 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 PSRC1Q6PGN9 363 aaPredicted RBP5.59□□□□□ -1.51
RFC3-202ENST00000434425 ZNF852Q6ZMS4 543 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms