RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 ATXN1LP0C7T5 689 aaKnown RBP12.9□□□□□ -0.35
DDX56-204ENST00000431640 PRDX6P30041 224 aa12.9□□□□□ -0.35
DDX56-204ENST00000431640 AVPR1AP37288 418 aa12.9□□□□□ -0.35
DDX56-204ENST00000431640 CCNG1P51959 295 aa12.9□□□□□ -0.35
DDX56-204ENST00000431640 OXCT1P55809 520 aa12.9□□□□□ -0.35
DDX56-204ENST00000431640 ACVR1Q04771 509 aa12.9□□□□□ -0.35
DDX56-204ENST00000431640 ZNF177Q13360 481 aaPredicted RBP12.9□□□□□ -0.35
DDX56-204ENST00000431640 VEPH1Q14D04 833 aa12.9□□□□□ -0.35
DDX56-204ENST00000431640 E2F5Q15329 346 aa12.9□□□□□ -0.35
DDX56-204ENST00000431640 RAB30Q15771 203 aa12.9□□□□□ -0.35
DDX56-204ENST00000431640 IL31Q6EBC2 164 aa12.9□□□□□ -0.35
DDX56-204ENST00000431640 NAPRTQ6XQN6 538 aa12.9□□□□□ -0.35
DDX56-204ENST00000431640 ADGRD2Q7Z7M1 963 aa12.9□□□□□ -0.35
DDX56-204ENST00000431640 SETD3Q86TU7 594 aaPredicted RBP12.9□□□□□ -0.35
DDX56-204ENST00000431640 CILP2Q8IUL8 1156 aa12.9□□□□□ -0.35
DDX56-204ENST00000431640 CEP97Q8IW35 865 aa12.9□□□□□ -0.35
DDX56-204ENST00000431640 KIRREL3Q8IZU9 778 aa12.9□□□□□ -0.35
DDX56-204ENST00000431640 ENDOVQ8N8Q3 282 aaKnown RBP12.9□□□□□ -0.35
DDX56-204ENST00000431640 GPR150Q8NGU9 434 aa12.9□□□□□ -0.35
DDX56-204ENST00000431640 OR6P1Q8NGX9 317 aa12.9□□□□□ -0.35
DDX56-204ENST00000431640 NXNL1Q96CM4 212 aa12.9□□□□□ -0.35
DDX56-204ENST00000431640 GPR78Q96P69 363 aa12.9□□□□□ -0.35
DDX56-204ENST00000431640 DENND2DQ9H6A0 471 aaPredicted RBP12.9□□□□□ -0.35
DDX56-204ENST00000431640 TLR9Q9NR96 1032 aa12.9□□□□□ -0.35
DDX56-204ENST00000431640 MRPL17Q9NRX2 175 aaKnown RBP12.9□□□□□ -0.35
DDX56-204ENST00000431640 UBA2Q9UBT2 640 aaPredicted RBP12.9□□□□□ -0.35
DDX56-204ENST00000431640 VWA7Q9Y334 891 aa12.9□□□□□ -0.35
DDX56-204ENST00000431640 RWDD3Q9Y3V2 267 aa12.9□□□□□ -0.35
DDX56-204ENST00000431640 ZFP37Q9Y6Q3 630 aaPredicted RBP12.9□□□□□ -0.35
DDX56-204ENST00000431640 PRR5-ARHGAP8B1AHC4 643 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 CRTAMO95727 393 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 NDST3O95803 873 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 GLP2RO95838 553 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 SBK3P0C264 359 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 HMGA1P17096 107 aaKnown RBP12.89□□□□□ -0.35
DDX56-204ENST00000431640 ATP5F1P24539 256 aaPredicted RBP12.89□□□□□ -0.35
DDX56-204ENST00000431640 SLC6A4P31645 630 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 GMPRP36959 345 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 GTF2A1P52655 376 aaPredicted RBP12.89□□□□□ -0.35
DDX56-204ENST00000431640 MXRA7P84157 204 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 ARHGAP8P85298 464 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 MLLT1Q03111 559 aaPredicted RBP12.89□□□□□ -0.35
DDX56-204ENST00000431640 GPM6BQ13491 265 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 ACAP2Q15057 778 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 ADGRF1Q5T601 910 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 MRNIPQ6NTE8 343 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 CNSTQ6PJW8 725 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 ZNF783Q6ZMS7 281 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 TMC7Q7Z402 723 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 SDCCAG8Q86SQ7 713 aaPredicted RBP12.89□□□□□ -0.35
DDX56-204ENST00000431640 CIR1Q86X95 450 aaPredicted RBP12.89□□□□□ -0.35
DDX56-204ENST00000431640 DENND1CQ8IV53 801 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 CFAP52Q8N1V2 620 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 ZNF781Q8N8C0 355 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 OR13J1Q8NGT2 312 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 HDAC10Q969S8 669 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 CNDP1Q96KN2 507 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 PSKH2Q96QS6 385 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 MGME1Q9BQP7 344 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.89□□□□□ -0.35
DDX56-204ENST00000431640 NCKIPSDQ9NZQ3 722 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 COLQQ9Y215 455 aaPredicted RBP12.89□□□□□ -0.35
DDX56-204ENST00000431640 L3MBTL1Q9Y468 752 aa12.89□□□□□ -0.35
DDX56-204ENST00000431640 F8W8V4 182 aa12.88□□□□□ -0.35
DDX56-204ENST00000431640 TK2O00142 265 aa12.88□□□□□ -0.35
DDX56-204ENST00000431640 MATN2O00339 956 aa12.88□□□□□ -0.35
DDX56-204ENST00000431640 SLC22A2O15244 555 aa12.88□□□□□ -0.35
DDX56-204ENST00000431640 HDAC3O15379 428 aa12.88□□□□□ -0.35
DDX56-204ENST00000431640 COCHO43405 550 aa12.88□□□□□ -0.35
DDX56-204ENST00000431640 LDB2O43679 373 aa12.88□□□□□ -0.35
DDX56-204ENST00000431640 DLX3O60479 287 aa12.88□□□□□ -0.35
DDX56-204ENST00000431640 PEX11AO75192 247 aa12.88□□□□□ -0.35
DDX56-204ENST00000431640 RPP40O75818 363 aaKnown RBP12.88□□□□□ -0.35
DDX56-204ENST00000431640 LATS1O95835 1130 aa12.88□□□□□ -0.35
DDX56-204ENST00000431640 S1PR4O95977 384 aa12.88□□□□□ -0.35
DDX56-204ENST00000431640 PENKP01210 267 aaPredicted RBP12.88□□□□□ -0.35
DDX56-204ENST00000431640 RB1P06400 928 aa12.88□□□□□ -0.35
DDX56-204ENST00000431640 RHOCP08134 193 aa12.88□□□□□ -0.35
DDX56-204ENST00000431640 F7P08709 466 aaPredicted RBP12.88□□□□□ -0.35
DDX56-204ENST00000431640 LTA4HP09960 611 aaKnown RBP12.88□□□□□ -0.35
DDX56-204ENST00000431640 TFEBP19484 476 aa12.88□□□□□ -0.35
DDX56-204ENST00000431640 ADSLP30566 484 aaPredicted RBP12.88□□□□□ -0.35
DDX56-204ENST00000431640 ARRB2P32121 409 aa12.88□□□□□ -0.35
DDX56-204ENST00000431640 GLRBP48167 497 aa12.88□□□□□ -0.35
DDX56-204ENST00000431640 NAGLUP54802 743 aa12.88□□□□□ -0.35
DDX56-204ENST00000431640 SMAD3P84022 425 aaKnown RBP12.88□□□□□ -0.35
DDX56-204ENST00000431640 KDSRQ06136 332 aa12.88□□□□□ -0.35
DDX56-204ENST00000431640 NSUN2Q08J23 767 aaKnown RBP eCLIP12.88□□□□□ -0.35
DDX56-204ENST00000431640 RAB33AQ14088 237 aa12.88□□□□□ -0.35
DDX56-204ENST00000431640 ZRSR2Q15696 482 aaKnown RBP12.88□□□□□ -0.35
DDX56-204ENST00000431640 HECTD2Q5U5R9 776 aa12.88□□□□□ -0.35
DDX56-204ENST00000431640 SEL1L3Q68CR1 1132 aa12.88□□□□□ -0.35
DDX56-204ENST00000431640 FAM45BPQ6NSW5 357 aa12.88□□□□□ -0.35
DDX56-204ENST00000431640 PIWIL4Q7Z3Z4 852 aaKnown RBP12.88□□□□□ -0.35
DDX56-204ENST00000431640 MAVSQ7Z434 540 aa12.88□□□□□ -0.35
DDX56-204ENST00000431640 PTAR1Q7Z6K3 402 aaPredicted RBP12.88□□□□□ -0.35
DDX56-204ENST00000431640 SLC22A9Q8IVM8 553 aa12.88□□□□□ -0.35
DDX56-204ENST00000431640 MFSD6LQ8IWD5 586 aa12.88□□□□□ -0.35
DDX56-204ENST00000431640 RBM15BQ8NDT2 890 aaKnown RBP12.88□□□□□ -0.35
DDX56-204ENST00000431640 FAM45AQ8TCE6 357 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms