RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 CXCR3P49682 368 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 NDST2P52849 883 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 NOMO1Q15155 1222 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 ITPRIPL2Q3MIP1 535 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 TRPC4APQ8TEL6 797 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 ARMC7Q9H6L4 198 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 RFPL2O75678 378 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 CDH3P22223 829 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 NTSP30990 170 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 GPD2P43304 727 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 PRKG2Q13237 762 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 LY6G5CQ5SRR4 150 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 LRRC34Q8IZ02 419 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 CENPLQ8N0S6 344 aaPredicted RBP17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 ALG3Q92685 438 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 CATSPER2Q96P56 530 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 SIRPGQ9P1W8 387 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 PRMT5O14744 637 aaPredicted RBP17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 WDR47O94967 919 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 AMZ1Q400G9 498 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 SLC39A4Q6P5W5 647 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 ANKLE1Q8NAG6 615 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 CCL22O00626 93 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 SERPINE1P05121 402 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 FOXM1Q08050 763 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 PDE12Q6L8Q7 609 aaKnown RBP17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 UBE2R2Q712K3 238 aaPredicted RBP17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 ADAMTSL2Q86TH1 951 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 ZNF555Q8NEP9 628 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 EFCAB1Q9HAE3 211 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 DNAJC28Q9NX36 388 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 GGA2Q9UJY4 613 aa17.15■□□□□ 0.34
SMARCA4-203ENST00000429416 CPED1A4D0V7 1026 aa17.14■□□□□ 0.34
SMARCA4-203ENST00000429416 CARD16Q5EG05 197 aa17.14■□□□□ 0.34
SMARCA4-203ENST00000429416 SH3PXD2AQ5TCZ1 1133 aa17.14■□□□□ 0.34
SMARCA4-203ENST00000429416 WDR93Q6P2C0 686 aa17.14■□□□□ 0.34
SMARCA4-203ENST00000429416 LONP2Q86WA8 852 aa17.14■□□□□ 0.34
SMARCA4-203ENST00000429416 EBNA1BP2Q99848 306 aaKnown RBP17.14■□□□□ 0.34
SMARCA4-203ENST00000429416 THEGQ9P2T0 379 aa17.14■□□□□ 0.34
SMARCA4-203ENST00000429416 HS6ST1O60243 411 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 PRKCGP05129 697 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 BLKP51451 505 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 FBXL12Q9NXK8 326 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 SNX6Q9UNH7 406 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 PLCH1Q4KWH8 1693 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 MATN3O15232 486 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 TEX28O15482 410 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 MT-CYBP00156 380 aaPredicted RBP17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 IL10RBQ08334 325 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 BBS7Q8IWZ6 715 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 DSELQ8IZU8 1212 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 EME1Q96AY2 570 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 APOPT1Q96IL0 206 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 FAXDC2Q96IV6 333 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 PWWP2AQ96N64 755 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 BTBD1Q9H0C5 482 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 RSPH9Q9H1X1 276 aaPredicted RBP17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 ELAC1Q9H777 363 aaKnown RBP17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 LEFTY2O00292 366 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 TULP2O00295 520 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 THRAP10827 490 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 HPCAL1P37235 193 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 CPSF6Q16630 551 aaKnown RBP eCLIP17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 AP5B1Q2VPB7 878 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 IRGCQ6NXR0 463 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 TMC3Q7Z5M5 1100 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 VPS50Q96JG6 964 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 ZFYVE19Q96K21 471 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 SLC39A8Q9C0K1 460 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 GDAP2Q9NXN4 497 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 TMCC3Q9ULS5 477 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 FAF1Q9UNN5 650 aaPredicted RBP17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 OR10H1Q9Y4A9 318 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 COLEC10Q9Y6Z7 277 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 SGTAO43765 313 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 GPR32O75388 356 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 RPP40O75818 363 aaKnown RBP17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 COX7A2P14406 83 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 TSPAN8P19075 237 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 MLLT1Q03111 559 aaPredicted RBP17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 UPP1Q16831 310 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 EML3Q32P44 896 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 FBXL22Q6P050 247 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 C8orf48Q96LL4 319 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 CA14Q9ULX7 337 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 PHF24Q9UPV7 400 aa17.14■□□□□ 0.33
SMARCA4-203ENST00000429416 RNF225M0QZC1 329 aaPredicted RBP17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 FFAR2O15552 330 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 ERAL1O75616 437 aaKnown RBP17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 ITGBL1O95965 494 aaPredicted RBP17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 ZNF621Q6ZSS3 439 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 AHI1Q8N157 1196 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 SEC16BQ96JE7 1060 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 CNDP1Q96KN2 507 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 ADAMTS10Q9H324 1103 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 SPATA6Q9NWH7 488 aaPredicted RBP17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 ARIH1Q9Y4X5 557 aaPredicted RBP17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 GLI3P10071 1580 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 IFNA14P01570 189 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 HNRNPH3P31942 346 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms