RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 GRAMD1AQ96CP6 724 aa9.2□□□□□ -0.94
SMC1A-203ENST00000428014 BTBD6Q96KE9 485 aa9.2□□□□□ -0.94
SMC1A-203ENST00000428014 BMFQ96LC9 184 aa9.2□□□□□ -0.94
SMC1A-203ENST00000428014 PPP1R2P1Q96PQ5 205 aa9.2□□□□□ -0.94
SMC1A-203ENST00000428014 BAG1Q99933 345 aaPredicted RBP9.2□□□□□ -0.94
SMC1A-203ENST00000428014 MAK16Q9BXY0 300 aaKnown RBP9.2□□□□□ -0.94
SMC1A-203ENST00000428014 NFKBIL1Q9UBC1 381 aaPredicted RBP9.2□□□□□ -0.94
SMC1A-203ENST00000428014 ANGPTL2Q9UKU9 493 aa9.2□□□□□ -0.94
SMC1A-203ENST00000428014 ADAMTS9Q9P2N4 1935 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 DOCK9Q9BZ29 2069 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 LRRD1A4D1F6 860 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 H3BM21 787 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 NEMP1O14524 444 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 APOL1O14791 398 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 MUSKO15146 869 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 SPOPO43791 374 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 MFSD11O43934 449 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 PGLSO95336 258 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 PAK4O96013 591 aaPredicted RBP9.19□□□□□ -0.94
SMC1A-203ENST00000428014 GP1BAP07359 652 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 CD48P09326 243 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 ALPPL2P10696 532 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 CYP2A6P11509 494 aaPredicted RBP9.19□□□□□ -0.94
SMC1A-203ENST00000428014 CCNB1P14635 433 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 COMTP21964 271 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 CTNNA2P26232 953 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 CETN2P41208 172 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 CDKN2BP42772 138 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 SCNN1BP51168 640 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 KIAA1024LP59773 190 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 ZNF211Q13398 564 aaPredicted RBP9.19□□□□□ -0.94
SMC1A-203ENST00000428014 PEX6Q13608 980 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 FGL2Q14314 439 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 LRRC14Q15048 493 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 SHBQ15464 509 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 ODF2Q5BJF6 829 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 SWT1Q5T5J6 900 aaKnown RBP9.19□□□□□ -0.94
SMC1A-203ENST00000428014 ARMC12Q5T9G4 340 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 N4BP2L1Q5TBK1 243 aaPredicted RBP9.19□□□□□ -0.94
SMC1A-203ENST00000428014 PSAPL1Q6NUJ1 521 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 ESRP1Q6NXG1 681 aaKnown RBP9.19□□□□□ -0.94
SMC1A-203ENST00000428014 LIPIQ6XZB0 460 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 BBS12Q6ZW61 710 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 USP45Q70EL2 814 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 RAB44Q7Z6P3 723 aaPredicted RBP9.19□□□□□ -0.94
SMC1A-203ENST00000428014 SPATS2Q86XZ4 545 aaKnown RBP9.19□□□□□ -0.94
SMC1A-203ENST00000428014 CAMK1DQ8IU85 385 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 CCDC13Q8IYE1 715 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 GALNT15Q8N3T1 639 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 TP53I13Q8NBR0 393 aaPredicted RBP9.19□□□□□ -0.94
SMC1A-203ENST00000428014 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.19□□□□□ -0.94
SMC1A-203ENST00000428014 TADA1Q96BN2 335 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 TSGA10Q9BZW7 698 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 PCDH12Q9NPG4 1184 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 NLGN3Q9NZ94 848 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 DKK4Q9UBT3 224 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 SALL4Q9UJQ4 1053 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 PCDHB9Q9Y5E1 797 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 PCDHA3Q9Y5H8 950 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 ACTL7AQ9Y615 435 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 SLCO1B1Q9Y6L6 691 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 DGKBQ9Y6T7 804 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 EPG5Q9HCE0 2579 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 CHD8Q9HCK8 2581 aa9.19□□□□□ -0.94
SMC1A-203ENST00000428014 TP53BP1Q12888 1972 aaPredicted RBP9.19□□□□□ -0.94
SMC1A-203ENST00000428014 MED19A0JLT2 244 aaPredicted RBP9.18□□□□□ -0.94
SMC1A-203ENST00000428014 FAM170AA1A519 330 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 IGLON5A6NGN9 336 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 ANKRD36A6QL64 1941 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 APOC4-APOC2K7ER74 178 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 RNF103O00237 685 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 SCAMP1O15126 338 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 SLC31A1O15431 190 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 ARHGAP6O43182 974 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 SH3BP5O60239 455 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 PIAS2O75928 621 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 APOC2P02655 101 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 ITGAVP06756 1048 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 TSHRP16473 764 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 ACP1P24666 158 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 HTR1BP28222 390 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 SSR1P43307 286 aaKnown RBP9.18□□□□□ -0.94
SMC1A-203ENST00000428014 RGRP47804 291 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 E2F1Q01094 437 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 KIF5AQ12840 1032 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 RALGDSQ12967 914 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 MMRN1Q13201 1228 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 UAP1L1Q3KQV9 507 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 ATP13A4Q4VNC1 1196 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 TEX44Q53QW1 395 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 SEL1L3Q68CR1 1132 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 ARHGAP36Q6ZRI8 547 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 Q6ZSR6 202 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 NRSN1Q8IZ57 195 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 FSTL5Q8N475 847 aaPredicted RBP9.18□□□□□ -0.94
SMC1A-203ENST00000428014 LRRC57Q8N9N7 239 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 DEFB124Q8NES8 71 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 OR6C4Q8NGE1 309 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 OR4C6Q8NH72 309 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 WDR48Q8TAF3 677 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms